RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ANKRD34CP0C6C1 535 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 ZSCAN22P10073 491 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 CAPN3P20807 821 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 BMP6P22004 513 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 NFKBIAP25963 317 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 CSF2RBP32927 897 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 TRIM23P36406 574 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 GARSP41250 739 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 PPM1FP49593 454 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 IRAK1P51617 712 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 NDST2P52849 883 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 MAZP56270 477 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 HDAC4P56524 1084 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 ARF5P84085 180 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 GCNT1Q02742 428 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 GNA12Q03113 381 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 CETN1Q12798 172 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 IL11RAQ14626 422 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 TCEA2Q15560 299 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 ZRSR2Q15696 482 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 UGT8Q16880 541 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 WSCD2Q2TBF2 565 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 MYLK3Q32MK0 819 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 SP5Q6BEB4 398 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 BRAT1Q6PJG6 821 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 SHISA2Q6UWI4 295 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 NOP9Q86U38 636 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 FMR1NBQ8N0W7 255 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 GUF1Q8N442 669 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 AVL9Q8NBF6 648 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 LINC00301Q8NCQ3 95 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 OR1E3Q8WZA6 343 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 TFAP2BQ92481 460 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 FUBP1Q96AE4 644 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 SH3KBP1Q96B97 665 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 PGAP3Q96FM1 320 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 HMCESQ96FZ2 354 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 HSH2DQ96JZ2 352 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 GDAP1L1Q96MZ0 367 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 NT5C1BQ96P26 610 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 USP28Q96RU2 1077 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 WRAP53Q9BUR4 548 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 TM6SF2Q9BZW4 377 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 UNKQ9C0B0 810 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 PHACTR1Q9C0D0 580 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 ZYG11BQ9C0D3 744 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 SIK2Q9H0K1 926 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 WDCPQ9H6R7 721 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 WDR26Q9H7D7 661 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 FGF22Q9HCT0 170 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 LATS2Q9NRM7 1088 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 ARHGEF38Q9NXL2 777 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 COX16Q9P0S2 106 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 TAAR2Q9P1P5 351 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 C5AR2Q9P296 337 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 RCOR3Q9P2K3 495 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 PPARGC1AQ9UBK2 798 aaKnown RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 STAP1Q9ULZ2 295 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 DAAM1Q9Y4D1 1078 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 PCDHB4Q9Y5E5 795 aa4.88□□□□□ -1.63
SDCBP-207ENST00000520168 KLF2Q9Y5W3 355 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-207ENST00000520168 NAV3Q8IVL0 2385 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PCM1Q15154 2024 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 POLEQ07864 2286 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TSPAN11A1L157 253 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ANKRD33BA6NCL7 494 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TMEM202A6NGA9 273 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 RASA4BC9J798 803 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PRSS44E7EML9 344 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CETN3O15182 167 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PPM1DO15297 605 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PMM2O15305 246 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SLC16A3O15427 465 aaKnown RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 RASA4O43374 803 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 KATNA1O75449 491 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 DAB1O75553 588 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CEACAM4O75871 244 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 MAP3K6O95382 1288 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PCCBP05166 539 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 MYCLP1P12525 358 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SLC2A4P14672 509 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SYT1P21579 422 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 F8A1P23610 371 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 MMP12P39900 470 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 MAPKAPK2P49137 400 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CXCR3P49682 368 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ITGA1P56199 1179 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 NME3Q13232 169 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 PKP1Q13835 747 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 HIF1AQ16665 826 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 UGP2Q16851 508 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 ALFQ53S48 1182 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 INO80DQ53TQ3 878 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 DCAF17Q5H9S7 520 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-207ENST00000520168 CFAP58Q5T655 872 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TCERG1LQ5VWI1 586 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 NKAIN2Q5VXU1 208 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 SLC6A19Q695T7 634 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 FOXR2Q6PJQ5 311 aa4.87□□□□□ -1.63
SDCBP-207ENST00000520168 TFAP2DQ7Z6R9 452 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms