RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
CSMD1-205ENST00000519623 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.38□□□□□ -0.43
CSMD1-205ENST00000519623 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 C9orf172C9J069 976 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 HLA-DQB2P05538 268 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 MMP2P08253 660 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 KRT7P08729 469 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 KDELR1P24390 212 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 EPHB1P54762 984 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 RPL26P61254 145 aaKnown RBP12.37□□□□□ -0.43
CSMD1-205ENST00000519623 SRSF6Q13247 344 aaKnown RBP12.37□□□□□ -0.43
CSMD1-205ENST00000519623 CLPPQ16740 277 aaPredicted RBP12.37□□□□□ -0.43
CSMD1-205ENST00000519623 PHF19Q5T6S3 580 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 ZNF605Q86T29 641 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 TRIM74Q86UV6 250 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 ZFAND4Q86XD8 727 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 RAVER1Q8IY67 606 aaKnown RBP12.37□□□□□ -0.43
CSMD1-205ENST00000519623 EXD1Q8NHP7 514 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 RNF157Q96PX1 679 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 DTLQ9NZJ0 730 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 FOXJ2Q9P0K8 574 aa12.37□□□□□ -0.43
CSMD1-205ENST00000519623 RPL26L1Q9UNX3 145 aaKnown RBP12.37□□□□□ -0.43
CSMD1-205ENST00000519623 PCYT1BQ9Y5K3 369 aaPredicted RBP12.37□□□□□ -0.43
CSMD1-205ENST00000519623 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 DNAJC6O75061 913 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 JCHAINP01591 159 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 PYGLP06737 847 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 CCL4P13236 92 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 PLA2G2AP14555 144 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 MX2P20592 715 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 MAN1A1P33908 653 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 ACTR1BP42025 376 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 MAPK10P53779 464 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 ACTR1AP61163 376 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 PEX6Q13608 980 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 QPCTQ16769 361 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 MAP9Q49MG5 647 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 FAM182AQ5T1J6 154 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 NKAIN2Q5VXU1 208 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 MARK2Q7KZI7 788 aaKnown RBP12.36□□□□□ -0.43
CSMD1-205ENST00000519623 DTX1Q86Y01 620 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 CCDC13Q8IYE1 715 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 PLD5Q8N7P1 536 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 CNTD1Q8N815 330 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 CCNYQ8ND76 341 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 LPCAT1Q8NF37 534 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 OR8K1Q8NGG5 319 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
CSMD1-205ENST00000519623 HDAC11Q96DB2 347 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 OR2M4Q96R27 311 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 DNAJC7Q99615 494 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 B3GNT4Q9C0J1 378 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 CDH19Q9H159 772 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 LCMT1Q9UIC8 334 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 DNPEPQ9ULA0 475 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 TTLL3Q9Y4R7 772 aa12.36□□□□□ -0.43
CSMD1-205ENST00000519623 OAS3Q9Y6K5 1087 aaKnown RBP12.36□□□□□ -0.43
CSMD1-205ENST00000519623 TRBV23OR9-2A0A075B6M9 112 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 IGHV1OR21-1A0A087WYE8 117 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 C3orf70A6NLC5 250 aaPredicted RBP12.35□□□□□ -0.43
CSMD1-205ENST00000519623 ANKRD66B4E2M5 251 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 KCNK1O00180 336 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
CSMD1-205ENST00000519623 INPP4BO15327 924 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 ZW10O43264 779 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 EML2O95834 649 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
CSMD1-205ENST00000519623 TMEM253P0C7T8 217 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 LIPCP11150 499 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 FGF3P11487 239 aaPredicted RBP12.35□□□□□ -0.43
CSMD1-205ENST00000519623 CD86P42081 329 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 SPINT3P49223 89 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 LIMK2P53671 638 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 PPIDQ08752 370 aaKnown RBP12.35□□□□□ -0.43
CSMD1-205ENST00000519623 LRP8Q14114 963 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 MESDQ14696 234 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 HENMT1Q5T8I9 393 aaKnown RBP12.35□□□□□ -0.43
CSMD1-205ENST00000519623 RCBTB1Q8NDN9 531 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 SLC35G2Q8TBE7 412 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 EID2BQ96D98 161 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 CHP1Q99653 195 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 FLNBO75369 2602 aaKnown RBP12.35□□□□□ -0.43
CSMD1-205ENST00000519623 SDK2Q58EX2 2172 aa12.35□□□□□ -0.43
CSMD1-205ENST00000519623 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 RGSL1A5PLK6 1076 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 FADS2P1A8MWK0 482 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 ZNF487B1APH4 448 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-205ENST00000519623 ZIC2O95409 532 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-205ENST00000519623 ASMTLO95671 621 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 CA4P22748 312 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 CSF2RBP32927 897 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 FASLGP48023 281 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 ARSDP51689 593 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 IFI35P80217 286 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-205ENST00000519623 ZBTB17Q13105 803 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms