RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ETNK1Q9HBU6 452 aa21.87■■□□□ 1.09
VEGFA-217ENST00000518538 NLGN3Q9NZ94 848 aa21.87■■□□□ 1.09
VEGFA-217ENST00000518538 IL17CQ9P0M4 197 aa21.87■■□□□ 1.09
VEGFA-217ENST00000518538 PRSS38A1L453 326 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 FADS2P1A8MWK0 482 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 ZNF185O15231 689 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 FFAR2O15552 330 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 TNFSF14O43557 240 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 ZSCAN5DPP0CG00 497 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 GIMD1P0DJR0 217 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 ALPPL2P10696 532 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 SIM1P81133 766 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-217ENST00000518538 MSLNQ13421 630 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-217ENST00000518538 TAF1AQ15573 450 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-217ENST00000518538 CYP1B1Q16678 543 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 HS1BP3Q53T59 392 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 PAPD7Q5XG87 772 aaKnown RBP21.86■■□□□ 1.09
VEGFA-217ENST00000518538 C4orf22Q6V702 233 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 RD3Q7Z3Z2 195 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 FSTL5Q8N475 847 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-217ENST00000518538 TRAM1L1Q8N609 369 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 DUSP23Q9BVJ7 150 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 SPATA16Q9BXB7 569 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 AP1M1Q9BXS5 423 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 BPIFA1Q9NP55 256 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 MRPL40Q9NQ50 206 aaKnown RBP21.86■■□□□ 1.09
VEGFA-217ENST00000518538 RAB6BQ9NRW1 208 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 SMARCAL1Q9NZC9 954 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 SLC17A4Q9Y2C5 497 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 PKP3Q9Y446 797 aa21.86■■□□□ 1.09
VEGFA-217ENST00000518538 DNAH14Q0VDD8 3507 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 LRP4O75096 1905 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 TRIM38O00635 465 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 INPP4BO15327 924 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 PPFIA2O75334 1257 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 LDOC1O95751 146 aaPredicted RBP21.85■■□□□ 1.09
VEGFA-217ENST00000518538 CEACAM5P06731 702 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 CTSEP14091 401 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 RPL22P35268 128 aaKnown RBP21.85■■□□□ 1.09
VEGFA-217ENST00000518538 SEMA5AQ13591 1074 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 ELOCQ15369 112 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 PDPK2PQ6A1A2 396 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 LINC00523Q86TU6 105 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 BRSK1Q8TDC3 778 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 MAGOHBQ96A72 148 aaKnown RBP21.85■■□□□ 1.09
VEGFA-217ENST00000518538 CNDP2Q96KP4 475 aaKnown RBP21.85■■□□□ 1.09
VEGFA-217ENST00000518538 CLPBQ9H078 707 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 CYP4F12Q9HCS2 524 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.85■■□□□ 1.09
VEGFA-217ENST00000518538 MOSPD1Q9UJG1 213 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 CNOT6Q9ULM6 557 aaKnown RBP21.85■■□□□ 1.09
VEGFA-217ENST00000518538 ARL5AQ9Y689 179 aa21.85■■□□□ 1.09
VEGFA-217ENST00000518538 GOLGA6L10A0A0M3HER8 536 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 CTAGE9A4FU28 777 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 C2orf81A6NN90 581 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 E7EVH7 732 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 LMO7DNF2Z398 122 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 TPP1O14773 563 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 SIGLEC6O43699 453 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 CRTAMO95727 393 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 LPOP22079 712 aaPredicted RBP21.84■■□□□ 1.09
VEGFA-217ENST00000518538 C1orf61Q13536 156 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 N4BP2L1Q5TBK1 243 aaPredicted RBP21.84■■□□□ 1.09
VEGFA-217ENST00000518538 TTC27Q6P3X3 843 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 TRIM74Q86UV6 250 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 SDR16C5Q8N3Y7 309 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 DTX3LQ8TDB6 740 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 SCN8AQ9UQD0 1980 aa21.84■■□□□ 1.09
VEGFA-217ENST00000518538 STX7O15400 261 aaKnown RBP21.83■■□□□ 1.09
VEGFA-217ENST00000518538 BUD23O43709 281 aaKnown RBP21.83■■□□□ 1.09
VEGFA-217ENST00000518538 SUN1O94901 812 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 IVLP07476 585 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 ANXA6P08133 673 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 SPAM1P38567 509 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 LMAN1P49257 510 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 PDE1BQ01064 536 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 DEFB133Q30KQ1 61 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 PROX2Q3B8N5 592 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 DOK6Q6PKX4 331 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 C17orf53Q8N3J3 647 aaPredicted RBP21.83■■□□□ 1.09
VEGFA-217ENST00000518538 SCARF2Q96GP6 870 aaPredicted RBP21.83■■□□□ 1.09
VEGFA-217ENST00000518538 CARS2Q9HA77 564 aaKnown RBP21.83■■□□□ 1.09
VEGFA-217ENST00000518538 IL26Q9NPH9 171 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 VPS18Q9P253 973 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 SUFUQ9UMX1 484 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 TMEM98Q9Y2Y6 226 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 SAR1BQ9Y6B6 198 aa21.83■■□□□ 1.09
VEGFA-217ENST00000518538 TDRD6O60522 2096 aaKnown RBP21.83■■□□□ 1.08
VEGFA-217ENST00000518538 PCNX2A6NKB5 2137 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 PHF2O75151 1096 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 FUCA1P04066 466 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 CELA2BP08218 269 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-217ENST00000518538 FTH1P19P0C7X4 201 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 COILP38432 576 aaPredicted RBP21.82■■□□□ 1.08
VEGFA-217ENST00000518538 POLD2P49005 469 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 ZCCHC8Q6NZY4 707 aaKnown RBP21.82■■□□□ 1.08
VEGFA-217ENST00000518538 GKN2Q86XP6 184 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 FAM181AQ8N9Y4 354 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 GLYATL1Q969I3 302 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 C19orf43Q9BQ61 176 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms