RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 GLRBP48167 497 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DGKGP49619 791 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ARFIP2P53365 341 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 POLR2LP62875 67 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FCHO2Q0JRZ9 810 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MESP2Q0VG99 397 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ASPHQ12797 758 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ADAM15Q13444 863 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NFATC2Q13469 925 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RCN2Q14257 317 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PDGFRLQ15198 375 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CTC1Q2NKJ3 1217 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GPR33Q49SQ1 333 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ACCSLQ4AC99 568 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZRANB3Q5FWF4 1079 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TCEAL5Q5H9L2 206 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 AARS2Q5JTZ9 985 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CTSL3PQ5NE16 218 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LYPLAL1Q5VWZ2 237 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FAM91A1Q658Y4 838 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GRAMD4Q6IC98 578 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TANGO2Q6ICL3 276 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KLC3Q6P597 504 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BRAT1Q6PJG6 821 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PAQR3Q6TCH7 311 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GDPD4Q6W3E5 623 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 Q6ZVU0 165 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SNX20Q7Z614 316 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MTDHQ86UE4 582 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TSPAN33Q86UF1 283 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PIM3Q86V86 326 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SPNS2Q8IVW8 549 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LSMEM2Q8N112 164 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 STK40Q8N2I9 435 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PHTF2Q8N3S3 785 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RYBPQ8N488 228 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KDM1BQ8NB78 822 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GPR26Q8NDV2 337 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PPP1R14CQ8TAE6 165 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RHEBL1Q8TAI7 183 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PIWIL2Q8TC59 973 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DTX3LQ8TDB6 740 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CYB5D2Q8WUJ1 264 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SREK1Q8WXA9 508 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 STON2Q8WXE9 905 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SORCS1Q8WY21 1168 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MYLIPQ8WY64 445 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PPP2R3CQ969Q6 453 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SKA1Q96BD8 255 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PTERQ96BW5 349 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LRIG1Q96JA1 1093 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SCYL1Q96KG9 808 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CNDP1Q96KN2 507 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HEPHQ9BQS7 1158 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TMEM120AQ9BXJ8 343 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DERL2Q9GZP9 239 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 P2RY12Q9H244 342 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 EBF3Q9H4W6 596 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TFB2MQ9H5Q4 396 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FAM96AQ9H5X1 160 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 NSUN3Q9H649 340 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 IGFLR1Q9H665 355 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 STN1Q9H668 368 aaKnown RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZDHHC6Q9H6R6 413 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BRD9Q9H8M2 597 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ECT2Q9H8V3 914 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GPAMQ9HCL2 828 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZFP14Q9HCL3 533 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HPS4Q9NQG7 708 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SAR1AQ9NR31 198 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PNPOQ9NVS9 261 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ELOVL2Q9NXB9 296 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TAS2R13Q9NYV9 303 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GALPQ9UBC7 116 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 XPR1Q9UBH6 696 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DKK3Q9UBP4 350 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HEY2Q9UBP5 337 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CDH22Q9UJ99 828 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 APPL1Q9UKG1 709 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CDH7Q9ULB5 785 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DNAJC16Q9Y2G8 782 aa5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MTF2Q9Y483 593 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.4-201ENST00000516969 COL4A3Q01955 1670 aa5.4□□□□□ -1.55
SCARNA20.4-201ENST00000516969 UBA6A0AVT1 1052 aaPredicted RBP5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 CAPN14A8MX76 684 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 PRRT4C9JH25 899 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 H3BMM5 538 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 MYO1CO00159 1063 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 PRMT5O14744 637 aaPredicted RBP5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 ZBTB14O43829 449 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 KLK8O60259 260 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 LEFTY1O75610 366 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 DNAJC8O75937 253 aaPredicted RBP5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 ATP5HO75947 161 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 IPO13O94829 963 aaKnown RBP5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 RHOBTB1O94844 696 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 PRAMEF1O95521 474 aa5.39□□□□□ -1.55
SCARNA20.4-201ENST00000516969 TSPAN12O95859 305 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms