RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 PITRM1Q5JRX3 1037 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 ICE2Q659A1 982 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 TXNDC11Q6PKC3 985 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 PAQR3Q6TCH7 311 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 TAS2R42Q7RTR8 314 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 CAMK1DQ8IU85 385 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 CBARPQ8N350 705 aaPredicted RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 RYBPQ8N488 228 aaPredicted RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 SHKBP1Q8TBC3 707 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 SLC22A17Q8WUG5 538 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 HERVK_113Q902F9 699 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 BADQ92934 168 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 STMN2Q93045 179 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 OTUB2Q96DC9 234 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 LYSMD1Q96S90 227 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 ATOH8Q96SQ7 321 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 THTPAQ9BU02 230 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 GSTO2Q9H4Y5 243 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 WDR55Q9H6Y2 383 aaPredicted RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 MEAF6Q9HAF1 191 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 EBF2Q9HAK2 575 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 EVLQ9UI08 416 aaPredicted RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 RNF112Q9ULX5 631 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 E5RI56 91 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 PRMT5O14744 637 aaPredicted RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 SMAD6O43541 496 aaKnown RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 FGF4P08620 206 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 HNRNPLP14866 589 aaKnown RBP eCLIP15.2■□□□□ 0.02
SDHA-218ENST00000515752 ZNF7P17097 686 aaPredicted RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 CD70P32970 193 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 CCR10P46092 362 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 INHBCP55103 352 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 IL2P60568 153 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 PDCD2Q16342 344 aaPredicted RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 PLPP4Q5VZY2 271 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 NXNQ6DKJ4 435 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 PSAPL1Q6NUJ1 521 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 ELMSAN1Q6PJG2 1045 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 PIANPQ8IYJ0 282 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 ULK2Q8IYT8 1036 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 SPPL3Q8TCT6 385 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 POF1BQ8WVV4 589 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 LMLNQ96KR4 655 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 FAM161BQ96MY7 647 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 GPR21Q99679 349 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 CPEB1Q9BZB8 566 aaKnown RBP15.2■□□□□ 0.02
SDHA-218ENST00000515752 TDP1Q9NUW8 608 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 PLK2Q9NYY3 685 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 SLC25A13Q9UJS0 675 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 FAM50BQ9Y247 325 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 MED16Q9Y2X0 877 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 TRAF6Q9Y4K3 522 aa15.2■□□□□ 0.02
SDHA-218ENST00000515752 OBSL1O75147 1896 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 CAPN8A6NHC0 703 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 HIDE1A8MVS5 230 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 STX16-NPEPL1H3BU86 382 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 NEMP1O14524 444 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 STX16O14662 325 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 ENTPD5O75356 428 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 RB1P06400 928 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 GFAPP14136 432 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 TCF3P15923 654 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 GJA1P17302 382 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 ITGALP20701 1170 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 RPS3P23396 243 aaKnown RBP eCLIP15.19■□□□□ 0.027e-7■■■■□ 20.3
SDHA-218ENST00000515752 KCNC1P48547 511 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 CCNG1P51959 295 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 GPR33Q49SQ1 333 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 PREPLQ4J6C6 727 aaPredicted RBP15.19■□□□□ 0.02
SDHA-218ENST00000515752 GRAMD4Q6IC98 578 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 LYSMD3Q7Z3D4 306 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 SNX20Q7Z614 316 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 CLYBLQ8N0X4 340 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 PHTF2Q8N3S3 785 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 PCDH20Q8N6Y1 951 aaKnown RBP15.19■□□□□ 0.02
SDHA-218ENST00000515752 PTGR2Q8N8N7 351 aaPredicted RBP15.19■□□□□ 0.02
SDHA-218ENST00000515752 MICAL1Q8TDZ2 1067 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 MOCOSQ96EN8 888 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 PDLIM5Q96HC4 596 aaKnown RBP15.19■□□□□ 0.02
SDHA-218ENST00000515752 SHCBP1LQ9BZQ2 653 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 ZNF385DQ9H6B1 395 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 BPIFA1Q9NP55 256 aa15.19■□□□□ 0.02
SDHA-218ENST00000515752 CXXC1Q9P0U4 656 aaPredicted RBP15.19■□□□□ 0.02
SDHA-218ENST00000515752 C1orf232A0A0U1RR37 186 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 SDHDO14521 159 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 ZNF197O14709 1029 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 POU2F2P09086 479 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 PRSS56P0CW18 603 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 GM2AP17900 193 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 CHRM3P20309 590 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 PIK3R1P27986 724 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 IRX1P78414 480 aaPredicted RBP15.18■□□□□ 0.02
SDHA-218ENST00000515752 CYLC2Q14093 348 aaPredicted RBP15.18■□□□□ 0.02
SDHA-218ENST00000515752 OR4D1Q15615 310 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 MYLK3Q32MK0 819 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 UNC50Q53HI1 259 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 ZDHHC20Q5W0Z9 365 aa15.18■□□□□ 0.02
SDHA-218ENST00000515752 PDE12Q6L8Q7 609 aaKnown RBP15.18■□□□□ 0.02
SDHA-218ENST00000515752 PLPP6Q8IY26 295 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms