RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PRAMEP78395 509 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 IRF4Q15306 451 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 FAM153CQ494X1 144 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 WDR45BQ5MNZ6 344 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 ALS2CLQ60I27 953 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 AFTPHQ6ULP2 937 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 FAM151BQ6UXP7 276 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 CEP68Q76N32 757 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 PALM2Q8IXS6 379 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 DEFB119Q8N690 84 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 TMEM145Q8NBT3 493 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 SNX19Q92543 992 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 TBATAQ96M53 351 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 TTC25Q96NG3 672 aa20.88■□□□□ 0.93
LSM6-207ENST00000515311 SUDS3Q9H7L9 328 aaPredicted RBP20.88■□□□□ 0.93
LSM6-207ENST00000515311 PLXNB3Q9ULL4 1909 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 FPGTO14772 594 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 SPAG6O75602 509 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 SRP72O76094 671 aaKnown RBP20.87■□□□□ 0.93
LSM6-207ENST00000515311 VAPBO95292 243 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 ARNTP27540 789 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 MC4RP32245 332 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 ARCN1P48444 511 aaKnown RBP20.87■□□□□ 0.93
LSM6-207ENST00000515311 PEX6Q13608 980 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 ITGA9Q13797 1035 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 CHRNA6Q15825 494 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 LONRF1Q17RB8 773 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 PNCKQ6P2M8 343 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 ADAMTSL4Q6UY14 1074 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 SERAC1Q96JX3 654 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 C9orf72Q96LT7 481 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 SPATA16Q9BXB7 569 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 TXLNGYQ9BZA5 131 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 FZD3Q9NPG1 666 aa20.87■□□□□ 0.93
LSM6-207ENST00000515311 MBNL1Q9NR56 388 aaKnown RBP20.87■□□□□ 0.93
LSM6-207ENST00000515311 FNDC3AQ9Y2H6 1198 aaKnown RBP20.87■□□□□ 0.93
LSM6-207ENST00000515311 AGAP14A8MT82 685 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 K7ESM1 405 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 SOD1P00441 154 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 PCCBP05166 539 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 ITGALP20701 1170 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 IGFALSP35858 605 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 PTGER3P43115 390 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 CACNG1Q06432 222 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 NFATC2Q13469 925 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 SIM2Q14190 667 aaPredicted RBP20.86■□□□□ 0.93
LSM6-207ENST00000515311 GPR33Q49SQ1 333 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 LYSMD4Q5XG99 296 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 RAET1GQ6H3X3 334 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 EMBQ6PCB8 327 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 TRMT10CQ7L0Y3 403 aaKnown RBP20.86■□□□□ 0.93
LSM6-207ENST00000515311 SNX20Q7Z614 316 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 PLA2G15Q8NCC3 412 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 OR6P1Q8NGX9 317 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 OR4L1Q8NH43 312 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 GSDMBQ8TAX9 411 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 FAM174AQ8TBP5 190 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 AENQ8WTP8 325 aaKnown RBP20.86■□□□□ 0.93
LSM6-207ENST00000515311 VPS35Q96QK1 796 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 KCNH6Q9H252 994 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 CDC42EP4Q9H3Q1 356 aaKnown RBP20.86■□□□□ 0.93
LSM6-207ENST00000515311 LRRC4CQ9HCJ2 640 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 SMOXQ9NWM0 555 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 HS3ST3A1Q9Y663 406 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 SLC30A1Q9Y6M5 507 aa20.86■□□□□ 0.93
LSM6-207ENST00000515311 WDFY4Q6ZS81 3184 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 FADS2P1A8MWK0 482 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 TOR1BO14657 336 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 GOT2P00505 430 aaKnown RBP20.85■□□□□ 0.93
LSM6-207ENST00000515311 TRIM23P36406 574 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 GPR1P46091 355 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 INPP5AQ14642 412 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 ATP13A5Q4VNC0 1218 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 ZNF449Q6P9G9 518 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 KYAT3Q6YP21 454 aaKnown RBP20.85■□□□□ 0.93
LSM6-207ENST00000515311 GCNT7Q6ZNI0 430 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 CYS1Q717R9 158 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 ABI3BPQ7Z7G0 1075 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 PELI3Q8N2H9 469 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 C1orf216Q8TAB5 229 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 ZNF398Q8TD17 642 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 CERS2Q96G23 380 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 AGAP2Q99490 1192 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 IRF2BPLQ9H1B7 796 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 NINJ2Q9NZG7 142 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 EIF2B4Q9UI10 523 aaKnown RBP20.85■□□□□ 0.93
LSM6-207ENST00000515311 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.85■□□□□ 0.93
LSM6-207ENST00000515311 CACNA1HO95180 2353 aa20.85■□□□□ 0.93
LSM6-207ENST00000515311 TRBV5-4A0A0C4DH59 114 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 SSTR1P30872 391 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 FOXN2P32314 431 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 DHPSP49366 369 aaPredicted RBP20.84■□□□□ 0.93
LSM6-207ENST00000515311 GPX6P59796 221 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 RACK1P63244 317 aaKnown RBP20.84■□□□□ 0.93
LSM6-207ENST00000515311 TCF15Q12870 199 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 KYNUQ16719 465 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 MAP9Q49MG5 647 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 C3orf62Q6ZUJ4 267 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 ARMCX6Q7L4S7 300 aa20.84■□□□□ 0.93
LSM6-207ENST00000515311 LMNTD2Q8IXW0 634 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms