RNA–Protein interactions for RNA: ENST00000515149.2

ATR-208, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-208ENST00000515149 DDX23Q9BUQ8 820 aaKnown RBP3.85□□□□□ -1.79
ATR-208ENST00000515149 IFT27Q9BW83 186 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 LHPPQ9H008 270 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 SIL1Q9H173 461 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 PLEKHA2Q9HB19 425 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 THAP1Q9NVV9 213 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 RAI14Q9P0K7 980 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 LRFN1Q9P244 771 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 ZHX1Q9UKY1 873 aaPredicted RBP3.85□□□□□ -1.79
ATR-208ENST00000515149 BAG5Q9UL15 447 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 AGO1Q9UL18 857 aaKnown RBP3.85□□□□□ -1.79
ATR-208ENST00000515149 LRCH1Q9Y2L9 728 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 SRPRBQ9Y5M8 271 aaKnown RBP3.85□□□□□ -1.79
ATR-208ENST00000515149 SIPA1L1O43166 1804 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 XIRP2A4UGR9 3374 aa3.85□□□□□ -1.79
ATR-208ENST00000515149 COL4A4P53420 1690 aaPredicted RBP3.84□□□□□ -1.79
ATR-208ENST00000515149 PLXNA1Q9UIW2 1896 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 MYH2Q9UKX2 1941 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 DOCK3Q8IZD9 2030 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 PLSCR5A0PG75 271 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 EPOPA6NHQ4 379 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 H0Y3Z8 333 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 KCNJ13O60928 360 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 LDB3O75112 727 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 DUSP11O75319 330 aaKnown RBP3.84□□□□□ -1.79
ATR-208ENST00000515149 SLC25A27O95847 323 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 ASGR1P07306 291 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 SETSIPP0DME0 302 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 ACTN1P12814 892 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 ADORA1P30542 326 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 COPB2P35606 906 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 RPS6KA3P51812 740 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 CTTNQ14247 550 aaKnown RBP3.84□□□□□ -1.79
ATR-208ENST00000515149 COG2Q14746 738 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 KIF19Q2TAC6 998 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 ZNF718Q3SXZ3 478 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 GFI1BQ5VTD9 330 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 TMEM268Q5VZI3 342 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 NAA16Q6N069 864 aaPredicted RBP3.84□□□□□ -1.79
ATR-208ENST00000515149 AADACL2Q6P093 401 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 SYT13Q7L8C5 426 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 RBFAQ8N0V3 343 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 SPATA5Q8NB90 893 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 KLHDC9Q8NEP7 349 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 TMEM18Q96B42 140 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 DOCK7Q96N67 2140 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 TEFMQ96QE5 360 aaKnown RBP3.84□□□□□ -1.79
ATR-208ENST00000515149 PKP4Q99569 1192 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 SLC25A33Q9BSK2 321 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 CXorf56Q9H5V9 222 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 UBE2ZQ9H832 354 aaPredicted RBP3.84□□□□□ -1.79
ATR-208ENST00000515149 AATFQ9NY61 560 aaKnown RBP eCLIP3.84□□□□□ -1.79
ATR-208ENST00000515149 HOXC10Q9NYD6 342 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 NLKQ9UBE8 527 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 HDAC6Q9UBN7 1215 aa3.84□□□□□ -1.79
ATR-208ENST00000515149 DNAH12Q6ZR08 3092 aa3.84□□□□□ -1.8
ATR-208ENST00000515149 A0A1B0GUL7 405 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 ABHD14A-ACY1A0A1B0GW23 586 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 SLC16A5O15375 505 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 ITM2AO43736 263 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 CABYRO75952 493 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 FLOT1O75955 427 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 GAS8-AS1O95177 125 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 CD4P01730 458 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 PGK2P07205 417 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 CSF1P09603 554 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 IFIT2P09913 472 aaKnown RBP3.83□□□□□ -1.8
ATR-208ENST00000515149 IL9P15248 144 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 KCNA5P22460 613 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 RFC1P35251 1148 aaPredicted RBP3.83□□□□□ -1.8
ATR-208ENST00000515149 MTNR1AP48039 350 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 MVDP53602 400 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 CCL23P55773 120 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 DLX5P56178 289 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 TUBA1BP68363 451 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 ILF3Q12906 894 aaKnown RBP eCLIP3.83□□□□□ -1.8
ATR-208ENST00000515149 KRTAP27-1Q3LI81 207 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 GORABQ5T7V8 394 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 TANGO2Q6ICL3 276 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 TATDN1Q6P1N9 297 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 PALB2Q86YC2 1186 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 CERS3Q8IU89 383 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 PRSS33Q8NF86 280 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 LILRB1Q8NHL6 650 aaPredicted RBP3.83□□□□□ -1.8
ATR-208ENST00000515149 ACER1Q8TDN7 264 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 GDPD5Q8WTR4 605 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 UPF3BQ9BZI7 483 aaKnown RBP3.83□□□□□ -1.8
ATR-208ENST00000515149 NPFFR1Q9GZQ6 430 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 UPF3AQ9H1J1 476 aaKnown RBP3.83□□□□□ -1.8
ATR-208ENST00000515149 GAREM1Q9H706 876 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 SH2D4AQ9H788 454 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 TLR8Q9NR97 1041 aaKnown RBP3.83□□□□□ -1.8
ATR-208ENST00000515149 DACT1Q9NYF0 836 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 HMG20BQ9P0W2 317 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 PTPRCP08575 1304 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 UMODL1Q5DID0 1318 aa3.83□□□□□ -1.8
ATR-208ENST00000515149 DENND3A2RUS2 1198 aa3.82□□□□□ -1.8
ATR-208ENST00000515149 E7EVH7 732 aa3.82□□□□□ -1.8
ATR-208ENST00000515149 MPHOSPH10O00566 681 aaKnown RBP3.82□□□□□ -1.8
ATR-208ENST00000515149 WDR46O15213 610 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms