RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 THOP1P52888 689 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 CCDC157Q569K6 752 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 SLC39A4Q6P5W5 647 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 MCOLN3Q8TDD5 553 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 EFHD2Q96C19 240 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-213ENST00000514442 SH3BP4Q9P0V3 963 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 DUX4Q9UBX2 424 aa13.11□□□□□ -0.31
TCOF1-213ENST00000514442 E7ENX8 843 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CLPXO76031 633 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PTGS2P35354 604 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 POLR2LP62875 67 aaKnown RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PWP1Q13610 501 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PTPRNQ16849 979 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 TMEM214Q6NUQ4 689 aaKnown RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 ZNF544Q6NX49 715 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 IL27RAQ6UWB1 636 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 KLHL32Q96NJ5 620 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 ALDH1A2O94788 518 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 HLA-DPA1P20036 260 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 ADSLP30566 484 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CAPGP40121 348 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 SLC7A2P52569 658 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 RALGDSQ12967 914 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 TUBA3EQ6PEY2 450 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 GK5Q6ZS86 529 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CIR1Q86X95 450 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PHC3Q8NDX5 983 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 OR52K2Q8NGK3 314 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 TEPSINQ96N21 525 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 SNX15Q9NRS6 342 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 ITM2BQ9Y287 266 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PCDHB9Q9Y5E1 797 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CCRL2O00421 344 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PPEF2O14830 753 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 BMP10O95393 424 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 XRCC1P18887 633 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CYP3A5P20815 502 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 GRK3P35626 688 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 SLC18A2Q05940 514 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 IL23RQ5VWK5 629 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 TAC4Q86UU9 113 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 ITFG1Q8TB96 612 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 RDH11Q8TC12 318 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CA12O43570 354 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 UNGP13051 313 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 PBX3P40426 434 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 SLC26A3P40879 764 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 GPX6P59796 221 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 CNTN1Q12860 1018 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 ILF2Q12905 390 aaKnown RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 LIPMQ5VYY2 423 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 FAM120BQ96EK7 910 aaKnown RBP13.1□□□□□ -0.31
TCOF1-213ENST00000514442 SCLYQ96I15 445 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 B3GALT6Q96L58 329 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 OPTCQ9UBM4 332 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
TCOF1-213ENST00000514442 SLC22A2O15244 555 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 TNFRSF21O75509 655 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 TP53BP2Q13625 1128 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 FRMD7Q6ZUT3 714 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 THAP5Q7Z6K1 395 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 OFCC1Q8IZS5 231 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 C19orf18Q8NEA5 215 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 NUAK2Q9H093 628 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 GLOD4Q9HC38 313 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 CFAP97Q9P2B7 532 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 KLHL3Q9UH77 587 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 SNX8Q9Y5X2 465 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 C2CD4BA6NLJ0 364 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 E9PAM4 449 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 WBP4O75554 376 aaKnown RBP13.09□□□□□ -0.31
TCOF1-213ENST00000514442 MPSTP25325 297 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 HOXD13P35453 343 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 MERTKQ12866 999 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 DBF4BQ8NFT6 615 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 FIG4Q92562 907 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 MIEF1Q9NQG6 463 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 FBXO5Q9UKT4 447 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 PSME2Q9UL46 239 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 CCDC182A6NF36 153 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 SNTNA6NMZ2 147 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 GABBR2O75899 941 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 DBTP11182 482 aaKnown RBP13.09□□□□□ -0.31
TCOF1-213ENST00000514442 RAB10P61026 200 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 CA9Q16790 459 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 SOWAHAQ2M3V2 549 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 PDZK1Q5T2W1 519 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 FAM45BPQ6NSW5 357 aa13.09□□□□□ -0.31
TCOF1-213ENST00000514442 PRSS55Q6UWB4 352 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms