RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SLC6A14Q9UN76 642 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 ANKRD6Q9Y2G4 727 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 LRP4O75096 1905 aa9.76□□□□□ -0.85
TOPBP1-209ENST00000513818 C2orf72A6NCS6 295 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 FAM187AA6NFU0 413 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 OR51F1A6NGY5 319 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 TLR4O00206 839 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 GAPDHSO14556 408 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 KHNYNO15037 678 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 VILLO15195 856 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 GDF9O60383 454 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 SDC3O75056 442 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 MTX2O75431 263 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 SEC31AO94979 1220 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 LPOP22079 712 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 HOXD12P35452 270 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 HMGCLP35914 325 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 SPAM1P38567 509 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 CTSKP43235 329 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 POLD2P49005 469 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 ARSDP51689 593 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 CDK3Q00526 305 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 NFATC4Q14934 902 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 AGERQ15109 404 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 TAF1AQ15573 450 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 CHRNA6Q15825 494 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 AASDHQ4L235 1098 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 HP1BP3Q5SSJ5 553 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 HENMT1Q5T8I9 393 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 PNCKQ6P2M8 343 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 LRRC8BQ6P9F7 803 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 SLC23A3Q6PIS1 610 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 PRR23CQ6ZRP0 262 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 SYDE1Q6ZW31 735 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 RBFAQ8N0V3 343 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 MFSD2AQ8NA29 543 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 PPHLN1Q8NEY8 458 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 BRSK1Q8TDC3 778 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 NAT14Q8WUY8 206 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 PDXPQ96GD0 296 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 SNF8Q96H20 258 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 APOOQ9BUR5 198 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 SPATA16Q9BXB7 569 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 NUSAP1Q9BXS6 441 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 TCEAL2Q9H3H9 227 aaPredicted RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 FAM83DQ9H4H8 585 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 TRABDQ9H4I3 376 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 FAM96AQ9H5X1 160 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 FGF22Q9HCT0 170 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 MRPL40Q9NQ50 206 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 PKP3Q9Y446 797 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 TCAF1Q9Y4C2 921 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 OAS3Q9Y6K5 1087 aaKnown RBP9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 PLXNB3Q9ULL4 1909 aa9.75□□□□□ -0.85
TOPBP1-209ENST00000513818 CFAP54Q96N23 3096 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 GLYATL1P3A0A0U1RQE8 302 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 TMEM202A6NGA9 273 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 C2orf81A6NN90 581 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 PRR5-ARHGAP8B1AHC4 643 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 TP73O15350 636 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A9O60656 530 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 PRAMEF1O95521 474 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CRTAMO95727 393 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 F7P08709 466 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF806P0C7X5 589 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 TSHRP16473 764 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A6P19224 532 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A1P22309 533 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A4P22310 534 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 NMBRP28336 390 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 MC4RP32245 332 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A3P35503 534 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 UGT1A5P35504 534 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 DPP6P42658 865 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 RABIFP47224 123 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CDKN1CP49918 316 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 THOP1P52888 689 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 EMP3P54852 163 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 DCDC1P59894 354 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 FZD2Q14332 565 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CSRP2Q16527 193 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 HLA-BQ31612 363 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 MSS51Q4VC12 460 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 ATP13A5Q4VNC0 1218 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 KHDC1Q4VXA5 237 aaKnown RBP9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 FNBP1LQ5T0N5 605 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 TSTD2Q5T7W7 516 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 HIBCHQ6NVY1 386 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CASC4Q6P4E1 433 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 ENPP7Q6UWV6 458 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 MARK2Q7KZI7 788 aaKnown RBP9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 ZNF765Q7L2R6 523 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 MAATS1Q7Z4T9 603 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 KIAA2013Q8IYS2 634 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 NRSN1Q8IZ57 195 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 MINDY1Q8N5J2 469 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CEP112Q8N8E3 955 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 MNS1Q8NEH6 495 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 CEP76Q8TAP6 659 aa9.74□□□□□ -0.85
TOPBP1-209ENST00000513818 OR1E3Q8WZA6 343 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms