RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	USP10	Q14694	798 aa	Known RBP	11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	SNX17	Q15036	470 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	FXN	Q16595	210 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	PXDC1	Q5TGL8	231 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	TAF2	Q6P1X5	1199 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	AQP12A	Q8IXF9	295 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	TRPM4	Q8TD43	1214 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	BBS2	Q9BXC9	721 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	IL22	Q9GZX6	179 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	TLR9	Q9NR96	1032 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	IARS2	Q9NSE4	1012 aa	Known RBP	11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	UCKL1	Q9NWZ5	548 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	GIMAP2	Q9UG22	337 aa		11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.12	□□□□□ -0.63
PDCD6-210	ENST00000513582	ZNF99	A8MXY4	864 aa	Predicted RBP	11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	HCRT	O43612	131 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	SCO1	O75880	301 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	TRIM16	O95361	564 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	MPO	P05164	745 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	TCF3	P15923	654 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	BDNF	P23560	247 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	OR2B6	P58173	313 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	BNIP2	Q12982	314 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	GOLGA7B	Q2TAP0	167 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	NT5DC4	Q86YG4	428 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	PELI3	Q8N2H9	469 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	OR6F1	Q8NGZ6	308 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	SEPT1	Q8WYJ6	367 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	BEX2	Q9BXY8	128 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	HOXC10	Q9NYD6	342 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	AASS	Q9UDR5	926 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	EVL	Q9UI08	416 aa	Predicted RBP	11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	USP22	Q9UPT9	525 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	MTF2	Q9Y483	593 aa	Predicted RBP	11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	FOCAD	Q5VW36	1801 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	PCP4L1	A6NKN8	68 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	hCG_2039718	K7EN88	272 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	ARHGAP33	O14559	1287 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	SLC22A1	O15245	554 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	LRIG2	O94898	1065 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	KRT6A	P02538	564 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	KRT6B	P04259	564 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	CYP2F1	P24903	491 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	GRM3	Q14832	879 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	AGAP6	Q5VW22	663 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	CLEC6A	Q6EIG7	209 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	TRNP1	Q6NT89	227 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	STRADA	Q7RTN6	431 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	OR52K1	Q8NGK4	314 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	VPS39	Q96JC1	886 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	AGAP4	Q96P64	663 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	CGRRF1	Q99675	332 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	PRRG3	Q9BZD7	231 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	GMIP	Q9P107	970 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	SARDH	Q9UL12	918 aa		11.11	□□□□□ -0.63
PDCD6-210	ENST00000513582	LINC00854	A0A1B0GVQ3	168 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	ZW10	O43264	779 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	CABYR	O75952	493 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	GPD1	P21695	349 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	TGM2	P21980	687 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	UBA1	P22314	1058 aa	Known RBP	11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	AKAP5	P24588	427 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	PSMB4	P28070	264 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	ARL4A	P40617	200 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	GPD2	P43304	727 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	NDST1	P52848	882 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	FOXD4	Q12950	439 aa	Predicted RBP	11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	NAB1	Q13506	487 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	SEMA5A	Q13591	1074 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	CTU2	Q2VPK5	515 aa	Known RBP	11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	RABL3	Q5HYI8	236 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	C6orf141	Q5SZD1	244 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	ANKRD34A	Q69YU3	496 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	FAM45BP	Q6NSW5	357 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	GDPD3	Q7L5L3	318 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	CLEC14A	Q86T13	490 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	DPP9	Q86TI2	863 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	P2RY8	Q86VZ1	359 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	METTL4	Q8N3J2	472 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	PIK3C3	Q8NEB9	887 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	FAM45A	Q8TCE6	357 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	RORB	Q92753	470 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	SLC30A3	Q99726	388 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	FTHL17	Q9BXU8	183 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	POMK	Q9H5K3	350 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	SMURF2	Q9HAU4	748 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	PDGFC	Q9NRA1	345 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	INTS10	Q9NVR2	710 aa	Known RBP	11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	FKBP14	Q9NWM8	211 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	CMTM6	Q9NX76	183 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	MAT2B	Q9NZL9	334 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	ANAPC2	Q9UJX6	822 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582		A8MX80	341 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	EVPLL	A8MZ36	301 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	OGT	O15294	1046 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	HUS1	O60921	280 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	MOCS2	O96007	188 aa	Predicted RBP	11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	CHRNA1	P02708	482 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	CYP2C8	P10632	490 aa		11.1	□□□□□ -0.63
PDCD6-210	ENST00000513582	THRB	P10828	461 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms