RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 C11orf70Q9BRQ4 267 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 SLC25A23Q9BV35 468 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 NAA15Q9BXJ9 866 aaKnown RBP10.86□□□□□ -0.67
DDX41-216ENST00000513562 SLC29A3Q9BZD2 475 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 SLC39A8Q9C0K1 460 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 GOLGA6AQ9NYA3 693 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 TBC1D29Q9UFV1 150 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 RWDD2AQ9UIY3 292 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 NOCTQ9UK39 431 aaKnown RBP10.86□□□□□ -0.67
DDX41-216ENST00000513562 FZD10Q9ULW2 581 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 TMEM98Q9Y2Y6 226 aa10.86□□□□□ -0.67
DDX41-216ENST00000513562 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 A0A1W2PQ67 120 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 A6NCN8 305 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 NPIPB15A6NHN6 443 aaPredicted RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 ARHGAP42A6NI28 874 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 C21orf140B9A014 251 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 SOCS5O75159 536 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 CPP00450 1065 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 C9P02748 559 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 KRT3P12035 628 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 CASP14P31944 242 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 RFC1P35251 1148 aaPredicted RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 MAPK9P45984 424 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 GPR1P46091 355 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 GFERP55789 205 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 IL11RAQ14626 422 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 CPZQ66K79 652 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 MARK2Q7KZI7 788 aaKnown RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 TECPR1Q7Z6L1 1165 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 SLC9B2Q86UD5 537 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 TRIM74Q86UV6 250 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 ZNF677Q86XU0 584 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 SRRM1Q8IYB3 904 aaKnown RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 LZTR1Q8N653 840 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 Q8NA96 180 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 CT55Q8WUE5 264 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 SLC20A1Q8WUM9 679 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 THAP4Q8WY91 577 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 SEC14L1Q92503 715 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 COX14Q96I36 57 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 C9orf72Q96LT7 481 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 PSKH2Q96QS6 385 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 OR6C1Q96RD1 312 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 HERPUD2Q9BSE4 406 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 TBC1D10AQ9BXI6 508 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 ACTL8Q9H568 366 aa10.85□□□□□ -0.67
DDX41-216ENST00000513562 ZNF768Q9H5H4 540 aaKnown RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 PCYT1BQ9Y5K3 369 aaPredicted RBP10.85□□□□□ -0.67
DDX41-216ENST00000513562 LILRA5A6NI73 299 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 F8VZ95 297 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 TOX3O15405 576 aaPredicted RBP10.84□□□□□ -0.67
DDX41-216ENST00000513562 CCP110O43303 1012 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 CCNYL3P0C7X3 344 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 CYP2A6P11509 494 aaPredicted RBP10.84□□□□□ -0.67
DDX41-216ENST00000513562 FGF5P12034 268 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 TNFAIP3P21580 790 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 NFKBIAP25963 317 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 VARSP26640 1264 aaKnown RBP10.84□□□□□ -0.67
DDX41-216ENST00000513562 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
DDX41-216ENST00000513562 RENBPP51606 427 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 TPI1P60174 286 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 SH3BP2P78314 561 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 CDR2Q01850 454 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 PTP4A2Q12974 167 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 MAN2A1Q16706 1144 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 UGT8Q16880 541 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 JMJD6Q6NYC1 403 aaPredicted RBP10.84□□□□□ -0.67
DDX41-216ENST00000513562 SCYL2Q6P3W7 929 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 WDR59Q6PJI9 974 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 ARHGAP36Q6ZRI8 547 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 TSPAN33Q86UF1 283 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 RASGRP3Q8IV61 690 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 ARHGAP12Q8IWW6 846 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 SLC30A5Q8TAD4 765 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 AP2M1Q96CW1 435 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 MCCC1Q96RQ3 725 aaPredicted RBP10.84□□□□□ -0.67
DDX41-216ENST00000513562 BRD8Q9H0E9 1235 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 SP110Q9HB58 689 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 LHX9Q9NQ69 397 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 OGFRQ9NZT2 677 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 CNOT8Q9UFF9 292 aaKnown RBP10.84□□□□□ -0.67
DDX41-216ENST00000513562 LNPEPQ9UIQ6 1025 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 PADI1Q9ULC6 663 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 PHTF1Q9UMS5 762 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 PCDHGC4Q9Y5F7 938 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 PCDHGB7Q9Y5F8 929 aa10.84□□□□□ -0.67
DDX41-216ENST00000513562 ZNF106Q9H2Y7 1883 aaKnown RBP10.83□□□□□ -0.68
DDX41-216ENST00000513562 KIR2DS5A0A0G2JLQ3 304 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 A0A0G2JNG1 304 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
DDX41-216ENST00000513562 KIR2DS3K7RE56 304 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 DNAJC6O75061 913 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 LRCH4O75427 683 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 SPAG6O75602 509 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 MT-ND3P03897 115 aa10.83□□□□□ -0.68
DDX41-216ENST00000513562 F3P13726 295 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms