RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 TSEN2Q8NCE0 465 aaKnown RBP11.49□□□□□ -0.57
RNF4-216ENST00000511859 RXFP2Q8WXD0 754 aa11.49□□□□□ -0.57
RNF4-216ENST00000511859 CENPIQ92674 756 aaPredicted RBP11.49□□□□□ -0.57
RNF4-216ENST00000511859 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
RNF4-216ENST00000511859 DTD2Q96FN9 168 aa11.49□□□□□ -0.57
RNF4-216ENST00000511859 GPR87Q9BY21 358 aa11.49□□□□□ -0.57
RNF4-216ENST00000511859 RAB6CQ9H0N0 254 aa11.49□□□□□ -0.57
RNF4-216ENST00000511859 PDFQ9HBH1 243 aa11.49□□□□□ -0.57
RNF4-216ENST00000511859 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
RNF4-216ENST00000511859 RCOR3Q9P2K3 495 aaPredicted RBP11.49□□□□□ -0.57
RNF4-216ENST00000511859 CCDC168Q8NDH2 2452 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 ZGRF1Q86YA3 2104 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 PSMD11O00231 422 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 PRAMEF11O60813 436 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 PALMO75781 387 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 MAP3K6O95382 1288 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 LSM8O95777 96 aaKnown RBP11.48□□□□□ -0.57
RNF4-216ENST00000511859 C9P02748 559 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 SLC2A4P14672 509 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 CYP11B1P15538 503 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 PON1P27169 355 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 PTPN9P43378 593 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 APBA1Q02410 837 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 DPTQ07507 201 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 NFATC2Q13469 925 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 NFKBIBQ15653 356 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 ISM2Q6H9L7 571 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 IYDQ6PHW0 289 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 SLFN11Q7Z7L1 901 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 RHOT1Q8IXI2 618 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 CCDC185Q8N715 623 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 AVL9Q8NBF6 648 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 PDCD6IPQ8WUM4 868 aaKnown RBP11.48□□□□□ -0.57
RNF4-216ENST00000511859 PNPLA2Q96AD5 504 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 C9orf72Q96LT7 481 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 OR6C1Q96RD1 312 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 ING2Q9H160 280 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 RUBCNLQ9H714 662 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 METTL5Q9NRN9 209 aaKnown RBP11.48□□□□□ -0.57
RNF4-216ENST00000511859 B4GALT6Q9UBX8 382 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 DNAJC12Q9UKB3 198 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 G3BP2Q9UN86 482 aaKnown RBP11.48□□□□□ -0.57
RNF4-216ENST00000511859 ENTPD4Q9Y227 616 aa11.48□□□□□ -0.57
RNF4-216ENST00000511859 MN1Q10571 1320 aaPredicted RBP11.47□□□□□ -0.57
RNF4-216ENST00000511859 GOLGA6CA6NDK9 693 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 GOLGA6BA6NDN3 693 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 OR5K4A6NMS3 321 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 J3KR12 359 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 HEXIM1O94992 359 aaKnown RBP11.47□□□□□ -0.57
RNF4-216ENST00000511859 GOLGA6DP0CG33 693 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 FGF5P12034 268 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 ETV3P41162 512 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 MAPK9P45984 424 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 GPR1P46091 355 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 RGRP47804 291 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 HDAC4P56524 1084 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 CNGA3Q16281 694 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
RNF4-216ENST00000511859 PRR30Q53SZ7 412 aaPredicted RBP11.47□□□□□ -0.57
RNF4-216ENST00000511859 CYB5D1Q6P9G0 228 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 SYVN1Q86TM6 617 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 NLRP8Q86W28 1048 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 GALNT13Q8IUC8 556 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 TIGD1Q96MW7 591 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 ACTL8Q9H568 366 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 LRRC19Q9H756 370 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 GOLGA6AQ9NYA3 693 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 LNPEPQ9UIQ6 1025 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 CNTRLQ7Z7A1 2325 aa11.47□□□□□ -0.57
RNF4-216ENST00000511859 PKDREJQ9NTG1 2253 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 PCNX1Q96RV3 2341 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 KIR2DS5A0A0G2JLQ3 304 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 A0A0G2JNG1 304 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 C2CD4BA6NLJ0 364 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 KIR2DS3K7RE56 304 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 FGF10O15520 208 aaPredicted RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 CREB3O43889 395 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 SPAG6O75602 509 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 CEACAM4O75871 244 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 EML2O95834 649 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 PYGLP06737 847 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 CYP2A6P11509 494 aaPredicted RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 PTPN4P29074 926 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 VIPR1P32241 457 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 SCNN1BP51168 640 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 AP1S1P61966 158 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 RPS15P62841 145 aaKnown RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 ELOAQ14241 798 aaKnown RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 RFTN1Q14699 578 aaPredicted RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 KIR2DS5Q14953 304 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 NR6A1Q15406 480 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 DENND2CQ68D51 928 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 Q6ZVL8 140 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 ZC3H18Q86VM9 953 aaKnown RBP11.46□□□□□ -0.57
RNF4-216ENST00000511859 PYROXD2Q8N2H3 581 aa11.46□□□□□ -0.57
RNF4-216ENST00000511859 CT55Q8WUE5 264 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms