RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 AGAP2Q99490 1192 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 TBC1D10AQ9BXI6 508 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 STK33Q9BYT3 514 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 RCOR3Q9P2K3 495 aaPredicted RBP18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 TBC1D29Q9UFV1 150 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 ARHGAP42A6NI28 874 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 KATNA1O75449 491 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 SORBS2O94875 1100 aaKnown RBP18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 MAN1A1P33908 653 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 TPI1P60174 286 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 RPL7AP62424 266 aaKnown RBP18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 SH3BP2P78314 561 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 OGDHQ02218 1023 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 SLC10A7Q0GE19 358 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 TRAF2Q12933 501 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 EIF2S3LQ2VIR3 472 aaKnown RBP18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 C6orf15Q6UXA7 325 aaPredicted RBP18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 PDCD6IPQ8WUM4 868 aaKnown RBP18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 SCAMP4Q969E2 229 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 RUFY1Q96T51 708 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 ABCG8Q9H221 673 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 GANQ9H2C0 597 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 SARS2Q9NP81 518 aaKnown RBP18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 CASS4Q9NQ75 786 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 CUEDC1Q9NWM3 386 aaPredicted RBP18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 OGFRQ9NZT2 677 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 PCDHB3Q9Y5E6 796 aa18.87■□□□□ 0.61
HMGCS1-206ENST00000511774 MN1Q10571 1320 aaPredicted RBP18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 A6NCN8 305 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 CPP00450 1065 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 ZNF143P52747 638 aaPredicted RBP18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 AP1S1P61966 158 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 DPTQ07507 201 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 FOXM1Q08050 763 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 CPZQ66K79 652 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 IYDQ6PHW0 289 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 ADAMTSL4Q6UY14 1074 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 ZNF677Q86XU0 584 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 APLFQ8IW19 511 aaPredicted RBP18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 TCTN2Q96GX1 697 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 PSKH2Q96QS6 385 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 TUBGCP2Q9BSJ2 902 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 SELENOOQ9BVL4 669 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 ADAM22Q9P0K1 906 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 KIAA1468Q9P260 1216 aa18.86■□□□□ 0.61
HMGCS1-206ENST00000511774 SIGLEC16A6NMB1 481 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 TCP11X1B4DZS4 312 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 DFFAO00273 331 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 KIAA0754O94854 1291 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 PRKCSHP14314 528 aaPredicted RBP18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 GPR1P46091 355 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 KLK7P49862 253 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 CHAF1BQ13112 559 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 SEMA5AQ13591 1074 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 PEX6Q13608 980 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 MAMDC2Q7Z304 686 aaPredicted RBP18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 TICAM1Q8IUC6 712 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 C3orf20Q8ND61 904 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 COX14Q96I36 57 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 MCCC1Q96RQ3 725 aaPredicted RBP18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 TWSG1Q9GZX9 223 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 AKIRIN1Q9H9L7 192 aaPredicted RBP18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 SP110Q9HB58 689 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 NOD2Q9HC29 1040 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 SRPK3Q9UPE1 567 aa18.85■□□□□ 0.61
HMGCS1-206ENST00000511774 EPHB6O15197 1021 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 DNAJC6O75061 913 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 CREG1O75629 220 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 PEX11BO96011 259 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 ANKRD34CP0C6C1 535 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 CTPS1P17812 591 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 IL10RBQ08334 325 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 LBRQ14739 615 aaKnown RBP18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 PPP1R15BQ5SWA1 713 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 MON1BQ7L1V2 547 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 GALNT13Q8IUC8 556 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 CT55Q8WUE5 264 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 ELMO2Q96JJ3 720 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 MCEEQ96PE7 176 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 PEBP4Q96S96 227 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 KCTD15Q96SI1 283 aaPredicted RBP18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 VPS16Q9H269 839 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 KCTD5Q9NXV2 234 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 LUZP4Q9P127 313 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 KCNK6Q9Y257 313 aa18.84■□□□□ 0.61
HMGCS1-206ENST00000511774 PIPSLA2A3N6 862 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 WIPF3A6NGB9 483 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 PSMD11O00231 422 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 EEF2KO00418 725 aaKnown RBP18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 INPP4BO15327 924 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 SOCS5O75159 536 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 TIAF1O95411 115 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 C9P02748 559 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 ATP1A1P05023 1023 aaKnown RBP18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 ERCC2P18074 760 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 EPHA4P54764 986 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 DNASE1L3Q13609 305 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 RFTN1Q14699 578 aaPredicted RBP18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 CLEC16AQ2KHT3 1053 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 PHF13Q86YI8 300 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms