RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 PYCR3Q53H96 274 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 TFDP3Q5H9I0 405 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 HENMT1Q5T8I9 393 aaKnown RBP12.07□□□□□ -0.48
CLDND1-223ENST00000511081 ZNF438Q7Z4V0 828 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 TMC3Q7Z5M5 1100 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 SFTPA2Q8IWL1 248 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLDND1-223ENST00000511081 LPCAT1Q8NF37 534 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 ATXN7L3BQ96GX2 97 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 AGAP3Q96P47 875 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 GSDMCQ9BYG8 508 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 LRRN3Q9H3W5 708 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 FAM83DQ9H4H8 585 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 LUC7LQ9NQ29 371 aaKnown RBP12.07□□□□□ -0.48
CLDND1-223ENST00000511081 SIRPGQ9P1W8 387 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 NFKBIL1Q9UBC1 381 aaPredicted RBP12.07□□□□□ -0.48
CLDND1-223ENST00000511081 SAE1Q9UBE0 346 aaPredicted RBP12.07□□□□□ -0.48
CLDND1-223ENST00000511081 CD84Q9UIB8 345 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
CLDND1-223ENST00000511081 EFR3BQ9Y2G0 817 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 REXO2Q9Y3B8 237 aaKnown RBP12.07□□□□□ -0.48
CLDND1-223ENST00000511081 TTLL3Q9Y4R7 772 aa12.07□□□□□ -0.48
CLDND1-223ENST00000511081 C1orf232A0A0U1RR37 186 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 LOC285095A0A1B0GVY8 99 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 TMX2-CTNND1H3BSU7 103 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 PJA2O43164 708 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 MTSS1O43312 755 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 B4GAT1O43505 415 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 EPOP01588 193 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 TNNT1P13805 278 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 PECAM1P16284 738 aaPredicted RBP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 PTPN3P26045 913 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 CCKBRP32239 447 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 CD68P34810 354 aaPredicted RBP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 COPS2P61201 443 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 GABREP78334 506 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 CDK18Q07002 472 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 ZFP36L1Q07352 338 aaKnown RBP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 ILF3Q12906 894 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 SQSTM1Q13501 440 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 SPIDRQ14159 915 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 TCEA2Q15560 299 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 PPP2R5EQ16537 467 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 ODF2Q5BJF6 829 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 FAM182AQ5T1J6 154 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 BBS12Q6ZW61 710 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 SPATA22Q8NHS9 363 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 WDR36Q8NI36 951 aaKnown RBP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 KIAA1524Q8TCG1 905 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 CCHCR1Q8TD31 782 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 TFB1MQ8WVM0 346 aaKnown RBP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 KRT35Q92764 455 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 LIN37Q96GY3 246 aaPredicted RBP12.06□□□□□ -0.48
CLDND1-223ENST00000511081 ANP32EQ9BTT0 268 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 CEP41Q9BYV8 373 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 CDH19Q9H159 772 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 DPEP2Q9H4A9 486 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 TAAR2Q9P1P5 351 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 VPS18Q9P253 973 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 LRIT1Q9P2V4 623 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 MOSPD1Q9UJG1 213 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 TMEM98Q9Y2Y6 226 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 PCDHA3Q9Y5H8 950 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 RNF215Q9Y6U7 377 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 DUSP10Q9Y6W6 482 aa12.06□□□□□ -0.48
CLDND1-223ENST00000511081 ZFC3H1O60293 1989 aaKnown RBP12.05□□□□□ -0.48
CLDND1-223ENST00000511081 CCDC187A0A096LP49 1063 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 SOWAHDA6NJG2 315 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 FADS2P1A8MWK0 482 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 CDRT15L2A8MXV6 281 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 HACD1B0YJ81 288 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 D6RAR5 112 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 RRP8O43159 456 aaKnown RBP12.05□□□□□ -0.48
CLDND1-223ENST00000511081 DNAJC6O75061 913 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 NDST3O95803 873 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 MT-CYBP00156 380 aaPredicted RBP12.05□□□□□ -0.48
CLDND1-223ENST00000511081 AK4P27144 223 aaPredicted RBP12.05□□□□□ -0.48
CLDND1-223ENST00000511081 ITPKBP27987 946 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 GNPDA1P46926 289 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 MARCKSL1P49006 195 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 DCDC1P59894 354 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 DYNLT1P63172 113 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 XRCC4Q13426 336 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 PEX6Q13608 980 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 KDELC1Q6UW63 502 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 RAD9BQ6WBX8 426 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 B4GALNT4Q76KP1 1039 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 SPRED1Q7Z699 444 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 PDZD3Q86UT5 571 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 NAGSQ8N159 534 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 ARL14Q8N4G2 192 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 ZDHHC1Q8WTX9 485 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 P3H4Q92791 437 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 RBM41Q96IZ5 413 aaKnown RBP12.05□□□□□ -0.48
CLDND1-223ENST00000511081 GFM1Q96RP9 751 aaKnown RBP12.05□□□□□ -0.48
CLDND1-223ENST00000511081 SRPK1Q96SB4 655 aaKnown RBP12.05□□□□□ -0.48
CLDND1-223ENST00000511081 VAT1Q99536 393 aa12.05□□□□□ -0.48
CLDND1-223ENST00000511081 LACRTQ9GZZ8 138 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms