RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CYP3A7-CYP3A51PA0A087WV96 503 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 MBD4O95243 580 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 ZBTB11O95625 1053 aaPredicted RBP6.82□□□□□ -1.32
USP53-206ENST00000510737 ANXA6P08133 673 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 CYP3A4P08684 503 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 ZNF12P17014 697 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 CYP3A7P24462 503 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 SLC16A2P36021 539 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 ADPRHP54922 357 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 RPS6P62753 249 aaKnown RBP6.82□□□□□ -1.32
USP53-206ENST00000510737 UBE3AQ05086 875 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 IKQ13123 557 aaPredicted RBP6.82□□□□□ -1.32
USP53-206ENST00000510737 ZNF367Q7RTV3 350 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 WDR75Q8IWA0 830 aaKnown RBP6.82□□□□□ -1.32
USP53-206ENST00000510737 TDRD5Q8NAT2 981 aaKnown RBP6.82□□□□□ -1.32
USP53-206ENST00000510737 CLEC4CQ8WTT0 213 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 C16orf70Q9BSU1 422 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 EIF2AQ9BY44 585 aaKnown RBP6.82□□□□□ -1.32
USP53-206ENST00000510737 CDT1Q9H211 546 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 HELLSQ9NRZ9 838 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.82□□□□□ -1.32
USP53-206ENST00000510737 LCTP09848 1927 aa6.82□□□□□ -1.32
USP53-206ENST00000510737 CEP295Q9C0D2 2601 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 ZBED9Q6R2W3 1325 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 FANCMQ8IYD8 2048 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 BPTFQ12830 3046 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 FSD2A1L4K1 749 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 C17orf102A2RUQ5 167 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 SRRM3A6NNA2 597 aaPredicted RBP6.81□□□□□ -1.32
USP53-206ENST00000510737 BTBD18B2RXH4 712 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 TAF4O00268 1085 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 CAND2O75155 1236 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 RPP40O75818 363 aaKnown RBP6.81□□□□□ -1.32
USP53-206ENST00000510737 FGF18O76093 207 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 LCKP06239 509 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 GHRP10912 638 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 MTHFRP42898 656 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 SLC1A4P43007 532 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 ZP1P60852 638 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 HNF4GQ14541 408 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 LPIN1Q14693 890 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 ZNF528Q3MIS6 628 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 DNTTIP2Q5QJE6 756 aaKnown RBP6.81□□□□□ -1.32
USP53-206ENST00000510737 PLPP4Q5VZY2 271 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 RASGRP2Q7LDG7 609 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 CLIP4Q8N3C7 705 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 TMEM217Q8N7C4 229 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 ZBTB44Q8NCP5 570 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 NAA15Q9BXJ9 866 aaKnown RBP6.81□□□□□ -1.32
USP53-206ENST00000510737 B3GNT4Q9C0J1 378 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 RANBP17Q9H2T7 1088 aaKnown RBP6.81□□□□□ -1.32
USP53-206ENST00000510737 TBC1D17Q9HA65 648 aa6.81□□□□□ -1.32
USP53-206ENST00000510737 ISY1Q9ULR0 285 aaKnown RBP6.81□□□□□ -1.32
USP53-206ENST00000510737 DMXL2Q8TDJ6 3036 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 MCIDASD6RGH6 385 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 PRDM1O75626 825 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 SURF6O75683 361 aaKnown RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 GLUD1P00367 558 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 SMIM10L2AP0DMW4 78 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 SMIM10L2BP0DMW5 78 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 GLUD2P49448 558 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 RHAGQ02094 409 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 HSDL1Q3SXM5 330 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 ALDH1L2Q3SY69 923 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 SBK1Q52WX2 424 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 SOWAHCQ53LP3 525 aaPredicted RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 RARS2Q5T160 578 aaKnown RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 OTUD1Q5VV17 481 aaPredicted RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 TMEM71Q6P5X7 295 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 TRABD2AQ86V40 505 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 TTC30AQ86WT1 665 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 ZNF444Q8N0Y2 327 aaPredicted RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 CMASQ8NFW8 434 aaPredicted RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 PPTC7Q8NI37 304 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 CASP10Q92851 521 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 SECISBP2LQ93073 1101 aaKnown RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 APOLD1Q96LR9 279 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 SETD4Q9NVD3 440 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 KCNG2Q9UJ96 466 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 MAGED2Q9UNF1 606 aaPredicted RBP6.8□□□□□ -1.32
USP53-206ENST00000510737 SLC4A4Q9Y6R1 1079 aa6.8□□□□□ -1.32
USP53-206ENST00000510737 NAV2Q8IVL1 2488 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 DSPP15924 2871 aaKnown RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 C3orf70A6NLC5 250 aaPredicted RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 EEF1GP26641 437 aaKnown RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 ADD2P35612 726 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 CSTF1Q05048 431 aaKnown RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 MGAT3Q09327 533 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 TRAF3Q13114 568 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 OS9Q13438 667 aaPredicted RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 FAM209BQ5JX69 171 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 TMEM88Q6PEY1 159 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 CCDC25Q86WR0 208 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 LURAP1LQ8IV03 231 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 MRPL43Q8N983 215 aaKnown RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 FAM110DQ8TAY7 271 aaPredicted RBP6.79□□□□□ -1.32
USP53-206ENST00000510737 C18orf8Q96DM3 657 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 TAAR1Q96RJ0 339 aa6.79□□□□□ -1.32
USP53-206ENST00000510737 MPHOSPH6Q99547 160 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms