RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 C10orf71Q711Q0 1435 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 DIP2AQ14689 1571 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CTSKP43235 329 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ZBTB6Q15916 424 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 BANPQ8N9N5 519 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 MIPEPQ99797 713 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ACKR2O00590 384 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 GNAZP19086 355 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 PROZP22891 400 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 GABARAPL2P60520 117 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 FKBP1AP62942 108 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 ADIGQ0VDE8 80 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 VMACQ2NL98 169 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ECHDC2Q86YB7 292 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 MRPS31Q92665 395 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 RPL36Q9Y3U8 105 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 FADS2O95864 444 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 RPL9P32969 192 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 TBX4P57082 545 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 KCTD8Q6ZWB6 473 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 C11orf65Q8NCR3 313 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 MTIF3Q9H2K0 278 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 TRIT1Q9H3H1 467 aaKnown RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 RHOCP08134 193 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 UBE2R2Q712K3 238 aaPredicted RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 MROH8Q9H579 483 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 VPS28Q9UK41 221 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 TEX51A0A1B0GUA7 166 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 DNAJB6O75190 326 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 UGT2B17O75795 530 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 RLN1P04808 185 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 UGT2B4P06133 528 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ENO2P09104 434 aaPredicted RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 MBTD1Q05BQ5 628 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 FSTL1Q12841 308 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 MERTKQ12866 999 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 RHEBQ15382 184 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 CA9Q16790 459 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 LLGL2Q6P1M3 1020 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 UNC5AQ6ZN44 842 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 SAMD14Q8IZD0 417 aaPredicted RBP8.35□□□□□ -1.07
HTT-208ENST00000510626 LRRC57Q8N9N7 239 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 ZNRF3Q9ULT6 936 aa8.35□□□□□ -1.07
HTT-208ENST00000510626 A0A1B0GVC2 190 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 KANTRA0A1W2PQU2 76 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 DNM1LO00429 736 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 RFXANKO14593 260 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 GMFGO60234 142 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 FECHP22830 423 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ALDH7A1P49419 539 aaKnown RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 GTF2BQ00403 316 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ARMC12Q5T9G4 340 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ALYREFQ86V81 257 aaKnown RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 ZSWIM2Q8NEG5 633 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 MED8Q96G25 268 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 SLC9A7Q96T83 725 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 MRI1Q9BV20 369 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 COG5Q9UP83 839 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ANKDD1BA6NHY2 528 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 S100A2P29034 98 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 FAM180AQ6UWF9 173 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 CERS6Q6ZMG9 384 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 AGMOQ6ZNB7 445 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 GATAD2AQ86YP4 633 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ZNF248Q8NDW4 579 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 PPP1R16BQ96T49 567 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 EIF2S3P41091 472 aaKnown RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 SLC15A1P46059 708 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 KLF10Q13118 480 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 NFKBIZQ9BYH8 718 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 FABP12A6NFH5 140 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 RHOAP61586 193 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 MED22Q15528 200 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 PIK3R6Q5UE93 754 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 DEF8Q6ZN54 512 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 FBXO30Q8TB52 745 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ALG2Q9H553 416 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 CLCA1A8K7I4 914 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 EPHB3P54753 998 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 SMARCB1Q12824 385 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 NFE2L1Q14494 772 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 PON3Q15166 354 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 DNAJB3Q8WWF6 145 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 SEPT5Q99719 369 aaPredicted RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 ZNF358Q9NW07 568 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ADGRE2Q9UHX3 823 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 APC2O95996 2303 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 SSTR3P32745 418 aaPredicted RBP8.34□□□□□ -1.07
HTT-208ENST00000510626 MNDAP41218 407 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 MTAPQ13126 283 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ALFQ53S48 1182 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 C7orf57Q8NEG2 295 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ELMO1Q92556 727 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 AIFM2Q9BRQ8 373 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 ARL8BQ9NVJ2 186 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 GTF2A1LQ9UNN4 478 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 TSPAN4O14817 238 aa8.34□□□□□ -1.07
HTT-208ENST00000510626 LTFP02788 710 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms