RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ZIC2O95409 532 aaPredicted RBP15.3■□□□□ 0.04
TPM3-219ENST00000509409 HLA-DQB2P05538 268 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 LIPCP11150 499 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 CD1CP29017 333 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 GPR3P46089 330 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 STC1P52823 247 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 GBE1Q04446 702 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 NIPAL4Q0D2K0 466 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 MESDQ14696 234 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 C16orf72Q14CZ0 275 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 PYCR3Q53H96 274 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 ZNF765Q7L2R6 523 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 CCDC13Q8IYE1 715 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 NAGSQ8N159 534 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 RCBTB1Q8NDN9 531 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 CCHCR1Q8TD31 782 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 SCARF2Q96GP6 870 aaPredicted RBP15.3■□□□□ 0.04
TPM3-219ENST00000509409 AHCYL2Q96HN2 611 aaKnown RBP15.3■□□□□ 0.04
TPM3-219ENST00000509409 TDRD1Q9BXT4 1180 aaKnown RBP15.3■□□□□ 0.04
TPM3-219ENST00000509409 MAK16Q9BXY0 300 aaKnown RBP15.3■□□□□ 0.04
TPM3-219ENST00000509409 PACSIN1Q9BY11 444 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 SEMA4CQ9C0C4 833 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 ZNHIT6Q9NWK9 470 aaKnown RBP15.3■□□□□ 0.04
TPM3-219ENST00000509409 KCNK4Q9NYG8 393 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 ACSL6Q9UKU0 697 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 ST14Q9Y5Y6 855 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 UNC13CQ8NB66 2214 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 ANKRD36A6QL64 1941 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 COL27A1Q8IZC6 1860 aaPredicted RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 IGHV5-10-1A0A0J9YXX1 117 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 SOD1P00441 154 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 CCL4P13236 92 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 PLA2G2AP14555 144 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 KDELR1P24390 212 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 MPSTP25325 297 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 CD86P42081 329 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 RPL26P61254 145 aaKnown RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 SLC10A2Q12908 348 aaPredicted RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 IHHQ14623 411 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 CLPPQ16740 277 aaPredicted RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 ZNF574Q6ZN55 896 aaPredicted RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 ZNF438Q7Z4V0 828 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 PQLC3Q8N755 202 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 ZSCAN1Q8NBB4 408 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 OR8K1Q8NGG5 319 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 ARRDC2Q8TBH0 407 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 FATE1Q969F0 183 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 SGF29Q96ES7 293 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 CCDC74BQ96LY2 380 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 SLC38A3Q99624 504 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 ARHGAP9Q9BRR9 750 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 MLPHQ9BV36 600 aaPredicted RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 XPO4Q9C0E2 1151 aaKnown RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 PKD2L2Q9NZM6 624 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 FOXJ2Q9P0K8 574 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 RPL26L1Q9UNX3 145 aaKnown RBP15.29■□□□□ 0.04
TPM3-219ENST00000509409 PRKAB1Q9Y478 270 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 KALRNO60229 2985 aa15.29■□□□□ 0.04
TPM3-219ENST00000509409 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 C9orf172C9J069 976 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 HGSO14964 777 aaPredicted RBP15.28■□□□□ 0.04
TPM3-219ENST00000509409 AKR1B10O60218 316 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 PRLP01236 227 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 ATP1A1P05023 1023 aaKnown RBP15.28■□□□□ 0.04
TPM3-219ENST00000509409 CSTF2P33240 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
TPM3-219ENST00000509409 SRSF6Q13247 344 aaKnown RBP15.28■□□□□ 0.04
TPM3-219ENST00000509409 NR1D2Q14995 579 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 SLC18A3Q16572 532 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 ODF2Q5BJF6 829 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 ALG1LQ6GMV1 187 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 CHST15Q7LFX5 561 aaPredicted RBP15.28■□□□□ 0.04
TPM3-219ENST00000509409 VASH2Q86V25 355 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.28■□□□□ 0.04
TPM3-219ENST00000509409 RAPGEF5Q92565 580 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 FAF2Q96CS3 445 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 MED8Q96G25 268 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 COX14Q96I36 57 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 RNF157Q96PX1 679 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 DPYSL5Q9BPU6 564 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 ADGRE3Q9BY15 652 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 FAM83DQ9H4H8 585 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 DTLQ9NZJ0 730 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 NENFQ9UMX5 172 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 HEY1Q9Y5J3 304 aa15.28■□□□□ 0.04
TPM3-219ENST00000509409 LRP4O75096 1905 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 IGHV1OR21-1A0A087WYE8 117 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 LRRD1A4D1F6 860 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 ANKRD66B4E2M5 251 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 KCNK1O00180 336 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 CBFA2T2O43439 604 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 TPM1P09493 284 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 CD82P27701 267 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 HNRNPH3P31942 346 aaKnown RBP15.27■□□□□ 0.04
TPM3-219ENST00000509409 SPINT3P49223 89 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 LIMK2P53671 638 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 AP1B1Q10567 949 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 TRA2AQ13595 282 aaKnown RBP eCLIP15.27■□□□□ 0.044e-13■■■■□ 25.8
TPM3-219ENST00000509409 LRP8Q14114 963 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 QPCTQ16769 361 aa15.27■□□□□ 0.04
TPM3-219ENST00000509409 KDELC2Q7Z4H8 507 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms