RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SH3KBP1Q96B97 665 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 RNF157Q96PX1 679 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 DNAJC7Q99615 494 aa13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 MLPHQ9BV36 600 aaPredicted RBP13.53□□□□□ -0.24
CCHCR1-227ENST00000508852 OR5K4A6NMS3 321 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 ANKRD66B4E2M5 251 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 PPP1R12AO14974 1030 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 SFTPCP11686 197 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 KDELR1P24390 212 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 GJC1P36383 396 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC1A1P43005 524 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 FASLGP48023 281 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 IFI35P80217 286 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 PPIDQ08752 370 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 PDK1Q15118 436 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC14A2Q15849 920 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 PYCR3Q53H96 274 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 LRRC38Q5VT99 294 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 KCTD16Q68DU8 428 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 PDPK2PQ6A1A2 396 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 ARRDC2Q8TBH0 407 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 COX14Q96I36 57 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 EPB41L1Q9H4G0 881 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 FAM83DQ9H4H8 585 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 CHKBQ9Y259 395 aa13.52□□□□□ -0.25
CCHCR1-227ENST00000508852 MGAQ8IWI9 3026 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 C1orf232A0A0U1RR37 186 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 B4GAT1O43505 415 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 ASMTLO95671 621 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 SOD1P00441 154 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 ITGB2P05107 769 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 AK4P27144 223 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 CSTF2P33240 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 SPINT3P49223 89 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 LIMK2P53671 638 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 MAZP56270 477 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 OR1D5P58170 312 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 DSC2Q02487 901 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 AMZ1Q400G9 498 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 ATP13A4Q4VNC1 1196 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 CCDC70Q6NSX1 233 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 DOK6Q6PKX4 331 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 NYAP1Q6ZVC0 841 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 USP53Q70EK8 1073 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 NAGSQ8N159 534 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 ZNF843Q8N446 348 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 AGBL5Q8NDL9 886 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 LPCAT1Q8NF37 534 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 OR10G6Q8NH81 332 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 TTC9Q92623 222 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 SGF29Q96ES7 293 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 MED8Q96G25 268 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 AHCYL2Q96HN2 611 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 TAAR9Q96RI9 348 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 HERPUD2Q9BSE4 406 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 ASPSCR1Q9BZE9 553 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 SUDS3Q9H7L9 328 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 DDX56Q9NY93 547 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 KCNK4Q9NYG8 393 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 DTLQ9NZJ0 730 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 CD84Q9UIB8 345 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 INTUQ9ULD6 942 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 PCDHGA3Q9Y5H0 932 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 COL6A6A6NMZ7 2263 aa13.51□□□□□ -0.25
CCHCR1-227ENST00000508852 LRRD1A4D1F6 860 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 STMND1H3BQB6 276 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 APOL1O14791 398 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 DUX1O43812 170 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 MTA2O94776 668 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 CLDN7O95471 211 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 PRLP01236 227 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 JCHAINP01591 159 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 FUCA1P04066 466 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 HLA-DQB2P05538 268 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 CD1CP29017 333 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 TNNT3P45378 269 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 POLD2P49005 469 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 NR2C2P49116 596 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 ATP1A2P50993 1020 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 MAPK10P53779 464 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 RAB15P59190 212 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 GBE1Q04446 702 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 MESDQ14696 234 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 ASTE1Q2TB18 679 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 HENMT1Q5T8I9 393 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 TMEM71Q6P5X7 295 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC9B2Q86UD5 537 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 NT5DC3Q86UY8 548 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 PQLC3Q8N755 202 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 SLC35G2Q8TBE7 412 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 USP7Q93009 1102 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 SCAMP4Q969E2 229 aa13.5□□□□□ -0.25
CCHCR1-227ENST00000508852 TEFMQ96QE5 360 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms