RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 GPR88Q9GZN0 384 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 BTBD1Q9H0C5 482 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 PRDM13Q9H4Q3 707 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 TRPV4Q9HBA0 871 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 PDE11AQ9HCR9 933 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 ZNF334Q9HCZ1 680 aaPredicted RBP3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 PNPLA8Q9NP80 782 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 LTB4R2Q9NPC1 389 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 TRPV5Q9NQA5 729 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 ASAH2Q9NR71 780 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 TMLHEQ9NVH6 421 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 DMAC2Q9NW81 257 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 GDAP2Q9NXN4 497 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 SIX4Q9UIU6 781 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 ITGA11Q9UKX5 1188 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 ASB3Q9Y575 518 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 PAXBP1Q9Y5B6 917 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 SCN1AP35498 2009 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 PTPRJQ12913 1337 aa3.69□□□□□ -1.82
UBE2D3-226ENST00000508635 NOTCH4Q99466 2003 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ZNF318Q5VUA4 2279 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 GOLGA6L4A6NEF3 574 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 PRR23AA6NEV1 266 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 POM121BA6NF01 834 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ZNF233A6NK53 670 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 HEPACAM2A8MVW5 462 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 EIF3DO15371 548 aaKnown RBP eCLIP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 HCRTO43612 131 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 RRP9O43818 475 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 HUS1O60921 280 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 PIAS2O75928 621 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 NXPH3O95157 252 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 TNNC2P02585 160 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 MT-ND5P03915 603 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 RPN1P04843 607 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 KRT19P08727 400 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 SP9P0CG40 484 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 HGFP14210 728 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 HMGA1P17096 107 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ENGP17813 658 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 BTF3P20290 206 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 CD72P21854 359 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ACAT1P24752 427 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ACVR2AP27037 513 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 GABRR2P28476 465 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 PCSK6P29122 969 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 CASP1P29466 404 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 GDI1P31150 447 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 RPS9P46781 194 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 LHX1P48742 406 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 PRIM2P49643 509 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 CCT8P50990 548 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 UBE2HP62256 183 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 FCHO2Q0JRZ9 810 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 BFSP1Q12934 665 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 DAG1Q14118 895 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 KCNAB1Q14722 419 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 VEPH1Q14D04 833 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 SNRNP35Q16560 246 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 NFIL3Q16649 462 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 KNOP1Q1ED39 458 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 SOWAHAQ2M3V2 549 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ARHGAP15Q53QZ3 475 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 TEDDM1Q5T9Z0 273 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 FBXO42Q6P3S6 717 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 FAM171BQ6P995 826 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 DPY19L3Q6ZPD9 716 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 TPRG1Q6ZUI0 275 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 RNF44Q7L0R7 432 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ASCL5Q7RTU5 278 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 TMEM150AQ86TG1 271 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ITIH5Q86UX2 942 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 CAND1Q86VP6 1230 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 CBWD2Q8IUF1 395 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 WDR49Q8IV35 697 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ARID3BQ8IVW6 561 aaPredicted RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 MFSD6LQ8IWD5 586 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 YAF2Q8IY57 180 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 TMEM86AQ8N2M4 240 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 BOLLQ8N9W6 283 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 KIAA0895Q8NCT3 520 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 SPATA18Q8TC71 538 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 SPPL2BQ8TCT7 592 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 NOC3LQ8WTT2 800 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 DEPDC1BQ8WUY9 529 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 FAM3CQ92520 227 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 CLDN23Q96B33 292 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 HPDLQ96IR7 371 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 LRRC3BQ96PB8 259 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 GSDMAQ96QA5 445 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 PKMYT1Q99640 499 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 PI4K2AQ9BTU6 479 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 DPCDQ9BVM2 203 aaPredicted RBP3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 MTMR12Q9C0I1 747 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 BLZF1Q9H2G9 400 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 TASP1Q9H6P5 420 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 ARNT2Q9HBZ2 717 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 HEBP1Q9NRV9 189 aa3.68□□□□□ -1.82
UBE2D3-226ENST00000508635 AGPAT3Q9NRZ7 376 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms