RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ABCF3Q9NUQ8 709 aa5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 GJD2Q9UKL4 321 aa5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 TTC7AQ9ULT0 858 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 LRRFIP2Q9Y608 721 aaKnown RBP5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 CEPT1Q9Y6K0 416 aa5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 KIAA0556O60303 1618 aa5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 ALKQ9UM73 1620 aa5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 UTYO14607 1347 aa5.14□□□□□ -1.59
TOPBP1-206ENST00000508524 ARHGEF12Q9NZN5 1544 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 ABCA8O94911 1581 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 CCDC196A0A1B0GTZ2 297 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 USP17L23D6RBM5 183 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 SNAP23O00161 211 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 FGF17O60258 216 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 MYOD1P15172 320 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 ABCD3P28288 659 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 PPM1FP49593 454 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 FOXD4Q12950 439 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 FGFBP1Q14512 234 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 MRGPRG-AS1Q2M3A8 158 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 FAM69AQ5T7M9 428 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 C19orf48Q6RUI8 117 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 PQLC2Q6ZP29 291 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 ZNF354CQ86Y25 554 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 KMT5CQ86Y97 462 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 FOXP4Q8IVH2 680 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 RNF113BQ8IZP6 322 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 CPXCR1Q8N123 301 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 CADM4Q8NFZ8 388 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 ST8SIA4Q92187 359 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 CDCA5Q96FF9 252 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 PCYT2Q99447 389 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 SLC25A18Q9H1K4 315 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 VEZTQ9HBM0 779 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 FBRSL1Q9HCM7 1045 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 SLC6A13Q9NSD5 602 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 POU2F3Q9UKI9 436 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 CYP46A1Q9Y6A2 500 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 RICTORQ6R327 1708 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 UGGT2Q9NYU1 1516 aa5.13□□□□□ -1.59
TOPBP1-206ENST00000508524 ABCA9Q8IUA7 1624 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 LILRA5A6NI73 299 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 ATP1A1P05023 1023 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 PYGLP06737 847 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 CPOXP36551 454 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 IL15P40933 162 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 PITX1P78337 314 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 DMP1Q13316 513 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 IRAK1BP1Q5VVH5 260 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 ZNF280DQ6N043 979 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 TRNP1Q6NT89 227 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 TRMT1LQ7Z2T5 733 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 PCDH20Q8N6Y1 951 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 NFKBIDQ8NI38 313 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 LRRC8CQ8TDW0 803 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 PPP1R13BQ96KQ4 1090 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 NR1H4Q96RI1 486 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 MTERF1Q99551 399 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 IFIH1Q9BYX4 1025 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 AAR2Q9Y312 384 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 LOXL2Q9Y4K0 774 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 NCOA1Q15788 1441 aa5.12□□□□□ -1.59
TOPBP1-206ENST00000508524 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 NTN3O00634 580 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 SLC22A3O75751 556 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 PAK4O96013 591 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 CD53P19397 219 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 ARL1P40616 181 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 PAFAH1B1P43034 410 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 TUBP50607 506 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 USP41Q3LFD5 358 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 C6orf141Q5SZD1 244 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 GPATCH4Q5T3I0 446 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 STXBP5Q5T5C0 1151 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 PMS2CLQ68D20 193 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 DUS1LQ6P1R4 473 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 ESX1Q8N693 406 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 RHBDF1Q96CC6 855 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 GRAMD2BQ96HH9 432 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 TRMT61BQ9BVS5 477 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 C1QTNF5Q9BXJ0 243 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 ZNF334Q9HCZ1 680 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 WASH6PQ9NQA3 447 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 UHRF1BP1Q6BDS2 1440 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 FANCAO15360 1455 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 NEO1Q92859 1461 aa5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 SETD1AO15047 1707 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 GREB1LQ9C091 1923 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-206ENST00000508524 TTC36A6NLP5 189 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 LRRC53A6NM62 1247 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 VCYO14598 125 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 CAPN9O14815 690 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 CFC1BP0CG36 223 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 CFC1P0CG37 223 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 TIMP3P35625 211 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 FMO5P49326 533 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 CSNK2A1P68400 391 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 PDE1BQ01064 536 aa5.1□□□□□ -1.59
TOPBP1-206ENST00000508524 NEXNQ0ZGT2 675 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms