RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 TRIML2Q8N7C3 387 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 JPH3Q8WXH2 748 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 OTUB2Q96DC9 234 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ITPKCQ96DU7 683 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SGF29Q96ES7 293 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PBKQ96KB5 322 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ZFRQ96KR1 1074 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM245Q9H330 911 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CRTAC1Q9NQ79 661 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 IMP3Q9NV31 184 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TLR6Q9Y2C9 796 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MAN2B2Q9Y2E5 1009 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 WDR37Q9Y2I8 494 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 AAR2Q9Y312 384 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 BOLA1Q9Y3E2 137 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SNX5Q9Y5X3 404 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PLXNA3P51805 1871 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LTBP2Q14767 1821 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 IGLV3-22A0A075B6J6 115 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TRIM64CA6NLI5 447 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ISM1B1AKI9 464 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PRAMEF26H0Y7S4 382 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PEX1O43933 1283 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CLDN11O75508 207 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLC35G4P0C7Q5 338 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 THEGLP0DJG4 465 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ENGP17813 658 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CHI3L1P36222 383 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PTPN9P43378 593 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CCL11P51671 97 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DLG4P78352 724 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GPR17Q13304 367 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GALNT3Q14435 633 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CDKN3Q16667 212 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 NDUFA9Q16795 377 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CBWD3Q5JTY5 395 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CBWD5Q5RIA9 395 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MARCH8Q5T0T0 291 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 HIBCHQ6NVY1 386 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LVRNQ6Q4G3 990 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MACC1Q6ZN28 852 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 OTOAQ7RTW8 1153 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ADCY4Q8NFM4 1077 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 OR52K2Q8NGK3 314 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SCAMP5Q8TAC9 235 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM40Q8WWA1 233 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF689Q96CS4 500 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MOCOSQ96EN8 888 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TMUB1Q9BVT8 246 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 WDR26Q9H7D7 661 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PISDQ9UG56 409 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PFDN2Q9UHV9 154 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TAF6LQ9Y6J9 622 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FNDC1Q4ZHG4 1894 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MYO7AQ13402 2215 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ARID1BQ8NFD5 2236 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 A0A1W2PQ72 361 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MYBPHLA2RUH7 354 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MIF4GDA9UHW6 222 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PLOD3O60568 738 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLC25A14O95258 325 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CTDNEP1O95476 244 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 UMPSP11172 480 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 KCNE1P15382 129 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TPH1P17752 444 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ITGA3P26006 1051 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 EEF1DP29692 281 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GRK6P43250 576 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ABCG1P45844 678 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SELENOVP59797 346 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 RPS7P62081 194 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GPS1Q13098 491 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CAMK1Q14012 370 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 USP10Q14694 798 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PLAC9Q5JTB6 97 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ARHGAP40Q5TG30 622 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 RASIP1Q5U651 963 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 NCEH1Q6PIU2 408 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CHST15Q7LFX5 561 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LIMS2Q7Z4I7 341 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FGD2Q7Z6J4 655 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FAM9CQ8IZT9 166 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 UBR7Q8N806 425 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC1AQ8NC01 280 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ICA1LQ8NDH6 482 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 OR10Q1Q8NGQ4 319 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ARRDC3Q96B67 414 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ERP27Q96DN0 273 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MAGED4Q96JG8 741 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FICDQ9BVA6 458 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SRMSQ9H3Y6 488 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SAYSD1Q9NPB0 183 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ADA2Q9NZK5 511 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 APOBEC3BQ9UH17 382 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PHTF1Q9UMS5 762 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF232Q9UNY5 417 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 AP4E1Q9UPM8 1137 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ENTPD4Q9Y227 616 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 M0QX08 132 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms