RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 TEKT4Q8WW24 435 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 HTR3CQ8WXA8 447 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 EXTL1Q92935 676 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 COX14Q96I36 57 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 GBP4Q96PP9 640 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 SUDS3Q9H7L9 328 aaPredicted RBP6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 MRPL47Q9HD33 250 aaKnown RBP6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 NT5MQ9NPB1 228 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 TMEM9Q9P0T7 183 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 CD84Q9UIB8 345 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 MOSPD1Q9UJG1 213 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 CNOT6Q9ULM6 557 aaKnown RBP6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 PHTF1Q9UMS5 762 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 TMEM98Q9Y2Y6 226 aa6.41□□□□□ -1.38
HMGN1P16-201ENST00000508308 IGHV1OR21-1A0A087WYE8 117 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 A0A0J9YYE9 177 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 A0A1W2PQ67 120 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PSMD11O00231 422 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PDE2AO00408 941 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 MFSD11O43934 449 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 TRBC1P01850 177 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 MMP2P08253 660 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 DESP17661 470 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 MPSTP25325 297 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 ALDH4A1P30038 563 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 ARL4AP40617 200 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 GARSP41250 739 aaKnown RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 ZNF165P49910 485 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 STC1P52823 247 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 LIMK2P53671 638 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 MAPK10P53779 464 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 TAS2R40P59535 323 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 DSC2Q02487 901 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 GALNT2Q10471 571 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 ILF3Q12906 894 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 SLC10A2Q12908 348 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 DPYSL3Q14195 570 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PIGHQ14442 188 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 CLCA4Q14CN2 919 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PAFAH1B3Q15102 231 aaKnown RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 TBR1Q16650 682 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 TSR1Q2NL82 804 aaKnown RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PYCR3Q53H96 274 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 RALGPS1Q5JS13 557 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PHF19Q5T6S3 580 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 MARC1Q5VT66 337 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 NCBP2-AS2Q69YL0 99 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 RAET1GQ6H3X3 334 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 DOK6Q6PKX4 331 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PIM3Q86V86 326 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 NLRP8Q86W28 1048 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 ZNF761Q86XN6 746 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 ATPAF2Q8N5M1 289 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PQLC3Q8N755 202 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 BMPERQ8N8U9 685 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 MAML1Q92585 1016 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 SYN2Q92777 582 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 FATE1Q969F0 183 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 TMEM159Q96B96 161 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 AP2M1Q96CW1 435 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 EID2BQ96D98 161 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 SGF29Q96ES7 293 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 TRIM11Q96F44 468 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 CCDC74BQ96LY2 380 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 CMKLR1Q99788 373 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 SEMA3CQ99985 751 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 RIOK2Q9BVS4 552 aaKnown RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 NUP85Q9BW27 656 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 GSDMCQ9BYG8 508 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 SPRY4Q9C004 299 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 B3GNT4Q9C0J1 378 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 NAT10Q9H0A0 1025 aaKnown RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PHPT1Q9NRX4 125 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 STARD5Q9NSY2 213 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PDP2Q9P2J9 529 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 PRKAB1Q9Y478 270 aa6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 OAS3Q9Y6K5 1087 aaKnown RBP6.4□□□□□ -1.38
HMGN1P16-201ENST00000508308 USP9XQ93008 2570 aaPredicted RBP6.4□□□□□ -1.39
HMGN1P16-201ENST00000508308 TRBV23OR9-2A0A075B6M9 112 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 A0A1W2PQJ5 194 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 A6NCN8 305 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CAPN8A6NHC0 703 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 RHPN2P1A8MT19 583 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 SMTNL1A8MU46 457 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 FADS2P1A8MWK0 482 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 HGSO14964 777 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 MATN3O15232 486 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 DNAJC6O75061 913 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CLDN7O95471 211 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ATP1A1P05023 1023 aaKnown RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ITGB2P05107 769 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 SERPING1P05155 500 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 HLA-DQB2P05538 268 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 FAM87AP0C7U9 286 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 THRAP10827 490 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CYP2A6P11509 494 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ACTR1BP42025 376 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 GPR3P46089 330 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 GPR1P46091 355 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms