RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PCDHB6Q9Y5E3 794 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 SRPRBQ9Y5M8 271 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ZHX2Q9Y6X8 837 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ATP10AO60312 1499 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 A2MP01023 1474 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 NINLQ9Y2I6 1382 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 LOC102723996A0A087X1L8 192 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 A0A1W2PQM1 296 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 UBE2Q2LH0YL09 131 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 LANCL1O43813 399 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 NOBOXO60393 691 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 LDLRP01130 860 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 NFICP08651 508 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ADRA2CP18825 462 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 TCEA1P23193 301 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ALDH3B1P43353 468 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ACADSBP45954 432 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ANXA11P50995 505 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 STX17P56962 302 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 SELENOVP59797 346 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 RNF4P78317 190 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 RELBQ01201 579 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 RAB32Q13637 225 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 IL18Q14116 193 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ANGPT1Q15389 498 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 TMC5Q6UXY8 1006 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 TRILQ7L0X0 811 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 RTN4RL2Q86UN3 420 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 FAM131BQ86XD5 332 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 IRF2BP1Q8IU81 584 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 SLC15A3Q8IY34 581 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 RASGEF1AQ8N9B8 481 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 BBS10Q8TAM1 723 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 DDX54Q8TDD1 881 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ATP8B4Q8TF62 1192 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 FAM122AQ96E09 287 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 MAP6Q96JE9 813 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 KLHL5Q96PQ7 755 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ASCL2Q99929 193 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ACBD6Q9BR61 282 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 UPF3BQ9BZI7 483 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 SLC6A16Q9GZN6 736 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 WDCPQ9H6R7 721 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 FSCN3Q9NQT6 498 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 CTSFQ9UBX1 484 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 HCN2Q9UL51 889 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 ERVK-11Q9UQG0 969 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 SF3B6Q9Y3B4 125 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 USP16Q9Y5T5 823 aa7.5□□□□□ -1.21
PDGFRA-206ENST00000508170 MAGI2Q86UL8 1455 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 DUOX2Q9NRD8 1548 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 EIF2AK4Q9P2K8 1649 aaKnown RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 HELTA6NFD8 242 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 GAGE10A6NGK3 116 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 OR2AG2A6NM03 316 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 GABRR3A8MPY1 467 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 SUPT3HB4E1H0 165 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 J3KTA2 159 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 HS3ST1O14792 307 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 PAPSS1O43252 624 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 CXCL14O95715 111 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 VCLP18206 1134 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 PTNP21246 168 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 PRDX5P30044 214 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 OTX2P32243 289 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 KCNQ4P56696 695 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 ASTE1Q2TB18 679 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 KLHL40Q2TBA0 621 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 CERKLQ49MI3 558 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 PABPC1LQ4VXU2 614 aaKnown RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 CBWD5Q5RIA9 395 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 MFSD14BQ5SR56 506 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 DMRTA1Q5VZB9 504 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 CDC73Q6P1J9 531 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 AACSQ86V21 672 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 NELFCDQ8IXH7 590 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 KATNAL2Q8IYT4 538 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 ARMC10Q8N2F6 343 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 MEIOBQ8N635 442 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 CD300LFQ8TDQ1 290 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 SH3RF2Q8TEC5 729 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 SNX19Q92543 992 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 MED30Q96HR3 178 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 GPR87Q9BY21 358 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 CDT1Q9H211 546 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 MRPL40Q9NQ50 206 aaKnown RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 FBXO34Q9NWN3 711 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 VPS9D1Q9Y2B5 631 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 PCDHB4Q9Y5E5 795 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 PRDM15P57071 1507 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 KANK1Q14678 1352 aa7.49□□□□□ -1.21
PDGFRA-206ENST00000508170 TRBV2A0A0J9YWF9 115 aa7.48□□□□□ -1.21
PDGFRA-206ENST00000508170 A0A0U1RQV5 110 aa7.48□□□□□ -1.21
PDGFRA-206ENST00000508170 MBD3L4A6NDZ8 208 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-206ENST00000508170 MBD3L3A6NE82 208 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-206ENST00000508170 ARHGAP42A6NI28 874 aa7.48□□□□□ -1.21
PDGFRA-206ENST00000508170 FAM90A7PA6NKC0 464 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms