RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 REPIN1Q9BWE0 567 aaKnown RBP9.08□□□□□ -0.96
CAST-220ENST00000508117 TWSG1Q9GZX9 223 aa9.08□□□□□ -0.96
CAST-220ENST00000508117 ZMYND15Q9H091 742 aa9.08□□□□□ -0.96
CAST-220ENST00000508117 PDCL3Q9H2J4 239 aa9.08□□□□□ -0.96
CAST-220ENST00000508117 ZNF768Q9H5H4 540 aaKnown RBP9.08□□□□□ -0.96
CAST-220ENST00000508117 CATSPERBQ9H7T0 1116 aa9.08□□□□□ -0.96
CAST-220ENST00000508117 SLC5A6Q9Y289 635 aa9.08□□□□□ -0.96
CAST-220ENST00000508117 ATP6V1DQ9Y5K8 247 aa9.08□□□□□ -0.96
CAST-220ENST00000508117 PIPSLA2A3N6 862 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 C2CD4BA6NLJ0 364 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 GOLGA8SH3BPF8 625 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 LRCH4O75427 683 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 MT-ND3P03897 115 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 CCNYL3P0C7X3 344 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 CYP11B1P15538 503 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 NFKBIAP25963 317 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 EPHB2P29323 1055 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 GARSP41250 739 aaKnown RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 RGRP47804 291 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 LEPRP48357 1165 aaKnown RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 HDAC4P56524 1084 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 APBA1Q02410 837 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 HHEXQ03014 270 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 BCL2L1Q07817 233 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 MRPL49Q13405 166 aaKnown RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 C15orf59Q2T9L4 293 aaPredicted RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 PYCR3Q53H96 274 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 RAB6CQ53S08 254 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 KLHL10Q6JEL2 608 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 TMEM135Q86UB9 458 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 SRRM1Q8IYB3 904 aaKnown RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 LZTR1Q8N653 840 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 CCDC185Q8N715 623 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 EMC1Q8N766 993 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 AVL9Q8NBF6 648 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 PRR7Q8TB68 274 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 RXFP2Q8WXD0 754 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 NCSTNQ92542 709 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 STAMBPL1Q96FJ0 436 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 DTD2Q96FN9 168 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 SLC25A23Q9BV35 468 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 GPR87Q9BY21 358 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 TRIM55Q9BYV6 548 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 MAGEB5Q9BZ81 275 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 RAB6CQ9H0N0 254 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 STN1Q9H668 368 aaKnown RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 LRRC19Q9H756 370 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 SUDS3Q9H7L9 328 aaPredicted RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 SIX2Q9NPC8 291 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 METTL5Q9NRN9 209 aaKnown RBP9.07□□□□□ -0.96
CAST-220ENST00000508117 B4GALT6Q9UBX8 382 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 DNAJC12Q9UKB3 198 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 PADI1Q9ULC6 663 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 ZNF451Q9Y4E5 1061 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 CSMD1Q96PZ7 3565 aa9.07□□□□□ -0.96
CAST-220ENST00000508117 FGF10O15520 208 aaPredicted RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 HNRNPRO43390 633 aaKnown RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 HTRA2O43464 458 aaPredicted RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 DPM1O60762 260 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 KATNA1O75449 491 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 CEACAM4O75871 244 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 DNAJB5O75953 348 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 HEXIM1O94992 359 aaKnown RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 MAP3K6O95382 1288 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 C9P02748 559 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 FGF5P12034 268 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 SLC2A4P14672 509 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 ZNF28P17035 718 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 VIPR1P32241 457 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 HTR7P34969 479 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 POLD2P49005 469 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 AIF1P55008 147 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 AP1S1P61966 158 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 NOMO3P69849 1222 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 PAK1Q13153 545 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 DNASE1L3Q13609 305 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 RFTN1Q14699 578 aaPredicted RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 CNGA3Q16281 694 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 CDO1Q16878 200 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 UGT8Q16880 541 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
CAST-220ENST00000508117 C2CD6Q53TS8 623 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 ZRANB3Q5FWF4 1079 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 JMJD6Q6NYC1 403 aaPredicted RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 CYB5D1Q6P9G0 228 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 IYDQ6PHW0 289 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 SLFN11Q7Z7L1 901 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 NLRP8Q86W28 1048 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 ZNF761Q86XN6 746 aaPredicted RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 Q8NA96 180 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 TSEN2Q8NCE0 465 aaKnown RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 PNPLA2Q96AD5 504 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 C5orf34Q96MH7 638 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 FCRL4Q96PJ5 515 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 HERPUD2Q9BSE4 406 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 UCK1Q9HA47 277 aa9.06□□□□□ -0.96
CAST-220ENST00000508117 RCOR3Q9P2K3 495 aaPredicted RBP9.06□□□□□ -0.96
CAST-220ENST00000508117 AJAP1Q9UKB5 411 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms