RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CNOT3O75175 753 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 EEDO75530 441 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SULT1C4O75897 302 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SEC14L2O76054 403 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SEC24DO94855 1032 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATE1O95260 518 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARIH2O95376 493 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 VTNP04004 478 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 JUNP05412 331 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GJB1P08034 283 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 INHBBP09529 407 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 MBL2P11226 248 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CDH1P12830 882 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATP6V1B2P21281 511 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 PAX3P23760 479 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GSTM2P28161 218 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GABRB3P28472 473 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 HTR1EP28566 365 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ADRA1AP35348 466 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GRK3P35626 688 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCR10P46092 362 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 LHX1P48742 406 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GMPSP49915 693 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ALDH3A2P51648 485 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GTF2A2P52657 109 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 TPD52P55327 224 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 DAOAP59103 153 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 C1QTNF8P60827 252 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SRSF11Q05519 484 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 TRAF2Q12933 501 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 NFATC3Q12968 1075 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CTBP1Q13363 440 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 PMS2P3Q13401 168 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 IL18R1Q13478 541 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ITGA7Q13683 1181 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 NFYCQ13952 458 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 POU6F1Q14863 301 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SMAD1Q15797 465 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CRY1Q16526 586 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 NDUFA5Q16718 116 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GEN1Q17RS7 908 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 RFX4Q33E94 735 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM98BQ52LJ0 330 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 AARS2Q5JTZ9 985 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 BRMS1LQ5PSV4 323 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF678Q5SXM1 525 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 HECTD2Q5U5R9 776 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 OTUD1Q5VV17 481 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 KANK2Q63ZY3 851 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 PM20D1Q6GTS8 502 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 OGFOD2Q6N063 350 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ANKRD26P1Q6NSI1 321 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM117BQ6P1L5 589 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ELMSAN1Q6PJG2 1045 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 TXNDC11Q6PKC3 985 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 LAYNQ6UX15 382 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ISLR2Q6UXK2 745 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ALKAL1Q6UXT8 129 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 BEND5Q7L4P6 421 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 THAP5Q7Z6K1 395 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 PTAR1Q7Z6K3 402 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GALNT13Q8IUC8 556 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SPPL2CQ8IUH8 684 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CEP97Q8IW35 865 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 DENND6AQ8IWF6 608 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC15A3Q8IY34 581 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 C8orf59Q8N0T1 100 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 DEPDC4Q8N2C3 294 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SVOPLQ8N434 492 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 IPMKQ8NFU5 416 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 RHEBL1Q8TAI7 183 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ADAMTS19Q8TE59 1207 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GIPC2Q8TF65 315 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GTF3C2Q8WUA4 911 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 HDAC2Q92769 488 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 FATE1Q969F0 183 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 RNF34Q969K3 372 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 AURKBQ96GD4 344 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ABHD8Q96I13 439 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF668Q96K58 619 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 UBXN10Q96LJ8 280 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 NSMCE2Q96MF7 247 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 IL12RB2Q99665 862 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 OMDQ99983 421 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 APOL2Q9BQE5 337 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 COLEC11Q9BWP8 271 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT2B28Q9BY64 529 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 DPEP3Q9H4B8 488 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GSTO2Q9H4Y5 243 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 LIN28AQ9H9Z2 209 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARNT2Q9HBZ2 717 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZFYVE28Q9HCC9 887 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 WDR6Q9NNW5 1121 aaKnown RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 VTA1Q9NP79 307 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SDR39U1Q9NRG7 319 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC38A7Q9NVC3 462 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 RIC8BQ9NVN3 520 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 SELENONQ9NZV5 590 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZIM2Q9NZV7 527 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 IFT80Q9P2H3 777 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms