RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 NTAN1Q96AB6 310 aa13.79□□□□□ -0.2
DDR1-260ENST00000507533 SH3KBP1Q96B97 665 aa13.79□□□□□ -0.2
DDR1-260ENST00000507533 DTD2Q96FN9 168 aa13.79□□□□□ -0.2
DDR1-260ENST00000507533 ELMO2Q96JJ3 720 aa13.79□□□□□ -0.2
DDR1-260ENST00000507533 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
DDR1-260ENST00000507533 STN1Q9H668 368 aaKnown RBP13.79□□□□□ -0.2
DDR1-260ENST00000507533 SARS2Q9NP81 518 aaKnown RBP13.79□□□□□ -0.2
DDR1-260ENST00000507533 SHANK1Q9Y566 2161 aa13.79□□□□□ -0.2
DDR1-260ENST00000507533 WASH4PA8MWX3 477 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 TRAFD1O14545 582 aaPredicted RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 CREB3O43889 395 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 PRAMEF11O60813 436 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 PALMO75781 387 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 HEXIM1O94992 359 aaKnown RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 LSM8O95777 96 aaKnown RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 ANKRD34CP0C6C1 535 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 TEAD1P28347 426 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 VIPR1P32241 457 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 GARSP41250 739 aaKnown RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 LEPRP48357 1165 aaKnown RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 NDST2P52849 883 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 EPHA4P54764 986 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 NAA30Q147X3 362 aaPredicted RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 NR6A1Q15406 480 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 NFKBIBQ15653 356 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 PYCR3Q53H96 274 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 HSD11B1LQ7Z5J1 315 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 SLFN11Q7Z7L1 901 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 PLXDC1Q8IUK5 500 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 JOSD2Q8TAC2 188 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 CT55Q8WUE5 264 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 FAM172AQ8WUF8 416 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 THAP4Q8WY91 577 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 CENPIQ92674 756 aaPredicted RBP13.78□□□□□ -0.2
DDR1-260ENST00000507533 OR6C1Q96RD1 312 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 TBC1D10AQ9BXI6 508 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 ACTL8Q9H568 366 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 CATSPERBQ9H7T0 1116 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 SIX2Q9NPC8 291 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 ACSS2Q9NR19 701 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 LNPEPQ9UIQ6 1025 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 ZNF451Q9Y4E5 1061 aa13.78□□□□□ -0.2
DDR1-260ENST00000507533 AKAP9Q99996 3911 aa13.77□□□□□ -0.2
DDR1-260ENST00000507533 ARGFXA6NJG6 315 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 C2CD4BA6NLJ0 364 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 DPM1O60762 260 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 PRF1P14222 555 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 NFKBIAP25963 317 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 PTPN9P43378 593 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 GPR1P46091 355 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 SEPHS1P49903 392 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 SCNN1BP51168 640 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 GFERP55789 205 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 SH3BP2P78314 561 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 LRP8Q14114 963 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 IL11RAQ14626 422 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 CHRNA6Q15825 494 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 UGT8Q16880 541 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 NAA35Q5VZE5 725 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 IYDQ6PHW0 289 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 Q6ZVL8 140 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 SLC9B2Q86UD5 537 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 GALNT13Q8IUC8 556 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 SEC14L1Q92503 715 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 MARVELD3Q96A59 401 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 C19orf60Q96EN9 201 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 C9orf72Q96LT7 481 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 NSMCE3Q96MG7 304 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 CINPQ9BW66 212 aaPredicted RBP13.77□□□□□ -0.21
DDR1-260ENST00000507533 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.77□□□□□ -0.21
DDR1-260ENST00000507533 ING2Q9H160 280 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 EPB41L1Q9H4G0 881 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 LRRC19Q9H756 370 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 LHX9Q9NQ69 397 aa13.77□□□□□ -0.21
DDR1-260ENST00000507533 HIVEP3Q5T1R4 2406 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 TNRC6AQ8NDV7 1962 aaKnown RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 ZNF106Q9H2Y7 1883 aaKnown RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 MN1Q10571 1320 aaPredicted RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 ARHGAP10A1A4S6 786 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 GTPBP10A4D1E9 387 aaKnown RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 C21orf140B9A014 251 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 HNRNPRO43390 633 aaKnown RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 KRT86O43790 486 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 SPAG6O75602 509 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 CBX6O95503 412 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 MT-ND3P03897 115 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 PAPOLAP51003 745 aaKnown RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 NOMO3P69849 1222 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 NSUN2Q08J23 767 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDR1-260ENST00000507533 ZRANB3Q5FWF4 1079 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 TRIM74Q86UV6 250 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 LZTR1Q8N653 840 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 CELF6Q96J87 481 aaKnown RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 CNOT8Q9UFF9 292 aaKnown RBP13.76□□□□□ -0.21
DDR1-260ENST00000507533 TBC1D29Q9UFV1 150 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
DDR1-260ENST00000507533 ZFHX3Q15911 3703 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms