RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 DEFB119Q8N690 84 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 PNPLA1Q8N8W4 532 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 OR6P1Q8NGX9 317 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 FBF1Q8TES7 1133 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 AP2M1Q96CW1 435 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 SPACA7Q96KW9 195 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 RIOK2Q9BVS4 552 aaKnown RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 FUT8Q9BYC5 575 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 SLC17A9Q9BYT1 436 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 FAM96AQ9H5X1 160 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 FZD3Q9NPG1 666 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 MBNL1Q9NR56 388 aaKnown RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 RAD18Q9NS91 495 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 C20orf96Q9NUD7 363 aaPredicted RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 MARCH4Q9P2E8 410 aaPredicted RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 SLC17A6Q9P2U8 582 aa14.12□□□□□ -0.15
RNF4-208ENST00000507247 TNRC6BQ9UPQ9 1833 aaKnown RBP14.12□□□□□ -0.15
RNF4-208ENST00000507247 FADS2P1A8MWK0 482 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 CXorf49A8MYA2 514 aaPredicted RBP14.11□□□□□ -0.15
RNF4-208ENST00000507247 K7ESM1 405 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 RAD51BO15315 384 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 SLC31A1O15431 190 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 LATO43561 262 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A9O60656 530 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 NDUFS2O75306 463 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 SRP72O76094 671 aaKnown RBP14.11□□□□□ -0.15
RNF4-208ENST00000507247 FSBPO95073 299 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 PRAMEF1O95521 474 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 SOD1P00441 154 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 F7P08709 466 aaPredicted RBP14.11□□□□□ -0.15
RNF4-208ENST00000507247 ABHD2P08910 425 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A6P19224 532 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A1P22309 533 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A4P22310 534 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A3P35503 534 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A5P35504 534 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 CCR5P51681 352 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 PTPN5P54829 565 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 DPTQ07507 201 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 SRSF5Q13243 272 aaKnown RBP14.11□□□□□ -0.15
RNF4-208ENST00000507247 SEMA3AQ14563 771 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 IRF4Q15306 451 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 HSP90AA5PQ58FG0 334 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 ZRANB3Q5FWF4 1079 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 ZDHHC20Q5W0Z9 365 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 PDPK2PQ6A1A2 396 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 PSAPL1Q6NUJ1 521 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 KDM7AQ6ZMT4 941 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 PIANPQ8IYJ0 282 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 TRAM1L1Q8N609 369 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 PLA2G15Q8NCC3 412 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 PRSS33Q8NF86 280 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 OR4L1Q8NH43 312 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 ASB12Q8WXK4 309 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 NELL1Q92832 810 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 BIRC7Q96CA5 298 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 SGSM3Q96HU1 749 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 KLF6Q99612 283 aaPredicted RBP14.11□□□□□ -0.15
RNF4-208ENST00000507247 MYOCQ99972 504 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 SPATA16Q9BXB7 569 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 CDH19Q9H159 772 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A7Q9HAW7 530 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A10Q9HAW8 530 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 UGT1A8Q9HAW9 530 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 IARS2Q9NSE4 1012 aaKnown RBP14.11□□□□□ -0.15
RNF4-208ENST00000507247 RABGEF1Q9UJ41 708 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 APPL1Q9UKG1 709 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 TMPRSS11EQ9UL52 423 aa14.11□□□□□ -0.15
RNF4-208ENST00000507247 A0A087WUV0 522 aaPredicted RBP14.1□□□□□ -0.15
RNF4-208ENST00000507247 TRBV5-4A0A0C4DH59 114 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 FAM159BA6NKW6 160 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 PCCBP05166 539 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 STX2P32856 288 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 PHBP35232 272 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 IGFALSP35858 605 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 NHLH1Q02575 133 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 RPL6Q02878 288 aaKnown RBP14.1□□□□□ -0.15
RNF4-208ENST00000507247 CACNG1Q06432 222 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 MGAT5Q09328 741 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 SGCGQ13326 291 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 NFATC2Q13469 925 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 LRRC14Q15048 493 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 ANGPT1Q15389 498 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 KBTBD12Q3ZCT8 623 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 ATP13A5Q4VNC0 1218 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 SPDYCQ5MJ68 293 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 RAET1GQ6H3X3 334 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 NEPROQ6NW34 567 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 SLC36A4Q6YBV0 504 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 CYS1Q717R9 158 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 SNX20Q7Z614 316 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 LDB1Q86U70 411 aaPredicted RBP14.1□□□□□ -0.15
RNF4-208ENST00000507247 NLRP8Q86W28 1048 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 SLC41A1Q8IVJ1 513 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 DENND6AQ8IWF6 608 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 ZNF398Q8TD17 642 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 DTX3LQ8TDB6 740 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 CENPTQ96BT3 561 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
RNF4-208ENST00000507247 ORAI3Q9BRQ5 295 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms