RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PROZP22891 400 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 PPP5CP53041 499 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 PNLIPRP2P54317 469 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 RAD23AP54725 363 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 TFF2Q03403 129 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CFHR1Q03591 330 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 KLF10Q13118 480 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 KCNC3Q14003 757 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 LPIN1Q14693 890 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 IGSF11Q5DX21 431 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 SGO1Q5FBB7 561 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 KIAA1614Q5VZ46 1190 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 KRT79Q5XKE5 535 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CRIP3Q6Q6R5 217 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 QSOX2Q6ZRP7 698 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CLEC17AQ6ZS10 378 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 DENND5BQ6ZUT9 1274 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CHST3Q7LGC8 479 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 GALNTL5Q7Z4T8 443 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLFN11Q7Z7L1 901 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 MRGPRGQ86SM5 289 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 GALNT13Q8IUC8 556 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 EPHX4Q8IUS5 362 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 MCEMP1Q8IX19 187 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 RBFAQ8N0V3 343 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 PARP16Q8N5Y8 322 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZBTB2Q8N680 514 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 GPATCH11Q8N954 259 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 HJURPQ8NCD3 748 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 OR14L1PQ8NHC6 308 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CEP76Q8TAP6 659 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 TMCO6Q96DC7 493 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 RRNAD1Q96FB5 475 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC41A2Q96JW4 573 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 PAFAH2Q99487 392 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 SH2D3AQ9BRG2 576 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 WDR83Q9BRX9 315 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CCDC106Q9BWC9 280 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 MRIQ9BWK5 157 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 LHPPQ9H008 270 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC28A3Q9HAS3 691 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 WSB2Q9NYS7 404 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CWC15Q9P013 229 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 COPG2Q9UBF2 871 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 PADI1Q9ULC6 663 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CCL27Q9Y4X3 112 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 CDC42BPGQ6DT37 1551 aa3.29□□□□□ -1.88
TRAPPC11-205ENST00000506426 HFM1A2PYH4 1435 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ATRNO75882 1429 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 COL11A2P13942 1736 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 TRBV5-3A0A0A0MS03 114 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 TMEM202A6NGA9 273 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 A6NL46 340 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 LINC01548A6NM66 108 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 STMND1H3BQB6 276 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CHL1O00533 1208 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 OGG1O15527 345 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 RGS11O94810 467 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 NDUFB4O95168 129 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 IGLV2-14P01704 120 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CBSLP0DN79 551 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 MYBL1P10243 752 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CTSAP10619 480 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 C6P13671 934 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 TRIM21P19474 475 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ANXA7P20073 488 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CHATP28329 748 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CTNNA1P35221 906 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CBSP35520 551 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 AVPR1AP37288 418 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 PRCPP42785 496 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF41P51814 821 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CDH12P55289 794 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 TAS2R40P59535 323 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 KRT83P78385 493 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 GAD2Q05329 585 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 FAM27E3Q08E93 113 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC10A2Q12908 348 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 GRAPQ13588 217 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 NEDD9Q14511 834 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 COG2Q14746 738 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 SMTNL2Q2TAL5 461 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CRY2Q49AN0 593 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CDONQ4KMG0 1287 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 DCAF6Q58WW2 860 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 PIK3CD-AS1Q5SR53 167 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 C6orf10Q5SRN2 563 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 LRIF1Q5T3J3 769 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 PLEKHA7Q6IQ23 1121 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 HEPHL1Q6MZM0 1159 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 IL27RAQ6UWB1 636 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ZNF793Q6ZN11 406 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 FAM47EQ6ZV65 393 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 TRILQ7L0X0 811 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 CCDC186Q7Z3E2 898 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 ARID3BQ8IVW6 561 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC35F3Q8IY50 421 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 KDM1BQ8NB78 822 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 SLC44A5Q8NCS7 719 aa3.28□□□□□ -1.88
TRAPPC11-205ENST00000506426 OR8K5Q8NH50 307 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms