RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PCDH20Q8N6Y1 951 aaKnown RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 DCAF4L2Q8NA75 395 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CLEC1AQ8NC01 280 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 OR6K2Q8NGY2 324 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CXorf40AQ8TE69 158 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 AGAP11Q8TF27 550 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CLEC4CQ8WTT0 213 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 THAP3Q8WTV1 239 aaPredicted RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 RNF139Q8WU17 664 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 RNF34Q969K3 372 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 HDAC10Q969S8 669 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ARHGEF26Q96DR7 871 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 SLC41A2Q96JW4 573 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 FER1L6-AS2Q96M78 137 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PWWP2AQ96N64 755 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 KLHL32Q96NJ5 620 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 GBP5Q96PP8 586 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ACCSQ96QU6 501 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 VKORC1Q9BQB6 163 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 BDH2Q9BUT1 245 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CEP44Q9C0F1 390 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 RNF32Q9H0A6 362 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 APOBEC3GQ9HC16 384 aaKnown RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 WASH6PQ9NQA3 447 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 DMRT3Q9NQL9 472 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 P4HTMQ9NXG6 502 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PPP4R2Q9NY27 417 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 STMN3Q9NZ72 180 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF212Q9UDV6 495 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CBLCQ9ULV8 474 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 SUFUQ9UMX1 484 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 R3HCC1Q9Y3T6 440 aaKnown RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 HS3ST4Q9Y661 456 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 RYR1P21817 5038 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 RYR2Q92736 4967 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 KIAA1549Q9HCM3 1950 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 IGHV5-51A0A0C4DH38 117 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 LILRA5A6NI73 299 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 FAM90A27PA6NNH2 459 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 KCNU1A8MYU2 1149 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 F5H5T6 163 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 I6L893 689 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CACNB4O00305 520 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 XPO1O14980 1071 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 KIAA0391O15091 583 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 THAP12O43422 761 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 KLHL41O60662 606 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SOX30O94993 753 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ASS1P00966 412 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 UMODP07911 640 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 EBLN1P0CF75 366 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 RARAP10276 462 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 MYCLP1P12525 358 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TNNI1P19237 187 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 OTX2P32243 289 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 THBS2P35442 1172 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 PRPHP41219 470 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ACTR1BP42025 376 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CHRNA4P43681 627 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 GNPDA1P46926 289 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 POLD2P49005 469 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TNFSF10P50591 281 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CTSCP53634 463 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CASP6P55212 293 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ACTR1AP61163 376 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 UBE2IP63279 158 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 PMP22Q01453 160 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 CACNG1Q06432 222 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ABRQ12979 859 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 AIMP2Q13155 320 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 NFATC2Q13469 925 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TRPC3Q13507 836 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TUBB3Q13509 450 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 NCOA4Q13772 614 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SNTB1Q13884 538 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ZRSR1Q15695 479 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SNRNP35Q16560 246 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TSR1Q2NL82 804 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 FOXD4L6Q3SYB3 417 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 FAM174BQ3ZCQ3 159 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ALFQ53S48 1182 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ZC3H12AQ5D1E8 599 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 C10orf62Q5T681 223 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TTC39BQ5VTQ0 682 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SYPL2Q5VXT5 272 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ARHGAP17Q68EM7 881 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 IYDQ6PHW0 289 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 FOXD4L3Q6VB84 417 aaPredicted RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 C11orf96Q7Z7L8 435 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ZSWIM9Q86XI8 627 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 MEX3DQ86XN8 651 aaKnown RBP3.29□□□□□ -1.88
TCOF1-208ENST00000506063 RAB43Q86YS6 212 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 PLXDC1Q8IUK5 500 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 TMTC1Q8IUR5 882 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 LRRC75A-AS1Q8N1F1 130 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 RPRMLQ8N4K4 120 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 ANKRD52Q8NB46 1076 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 SLC4A11Q8NBS3 891 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 MCUQ8NE86 351 aa3.29□□□□□ -1.88
TCOF1-208ENST00000506063 OR1N1Q8NGS0 311 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms