RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 CHKBQ9Y259 395 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 PRKAB1Q9Y478 270 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 PCDHGA3Q9Y5H0 932 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 B3GALT1Q9Y5Z6 326 aa11.31□□□□□ -0.6
SIL1-208ENST00000505945 NAV2Q8IVL1 2488 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 A0A0J9YYE9 177 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 MFSD11O43934 449 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 ASMTLO95671 621 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 EML2O95834 649 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 SERPINC1P01008 464 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 TRBC1P01850 177 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 ATP1A1P05023 1023 aaKnown RBP11.3□□□□□ -0.6
SIL1-208ENST00000505945 THRAP10827 490 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
SIL1-208ENST00000505945 UGT1A3P35503 534 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
SIL1-208ENST00000505945 PPM1FP49593 454 aaPredicted RBP11.3□□□□□ -0.6
SIL1-208ENST00000505945 ZNF165P49910 485 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 STC1P52823 247 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 DSC2Q02487 901 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 CLCA4Q14CN2 919 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 ATP13A4Q4VNC1 1196 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 TDRD12Q587J7 1177 aaKnown RBP11.3□□□□□ -0.6
SIL1-208ENST00000505945 HGSNATQ68CP4 663 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 TMEM71Q6P5X7 295 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 NLRP8Q86W28 1048 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 GALNT13Q8IUC8 556 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 LRRC49Q8IUZ0 686 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 IL22RA1Q8N6P7 574 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 EXD1Q8NHP7 514 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 SLC37A2Q8TED4 501 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 LRRN4Q8WUT4 740 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 SLC38A3Q99624 504 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 RIOK2Q9BVS4 552 aaKnown RBP11.3□□□□□ -0.6
SIL1-208ENST00000505945 NUP85Q9BW27 656 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 SLC12A9Q9BXP2 914 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 POLR1EQ9GZS1 481 aaKnown RBP11.3□□□□□ -0.6
SIL1-208ENST00000505945 RBM22Q9NW64 420 aaKnown RBP eCLIP11.3□□□□□ -0.6
SIL1-208ENST00000505945 OCIAD1Q9NX40 245 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 SLC39A1Q9NY26 324 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 IL17BQ9UHF5 180 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 TTLL3Q9Y4R7 772 aa11.3□□□□□ -0.6
SIL1-208ENST00000505945 PCYT1BQ9Y5K3 369 aaPredicted RBP11.3□□□□□ -0.6
SIL1-208ENST00000505945 A0A087X0T9 212 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CYSRT1A8MQ03 144 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 A8MU76 341 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 MYO1FO00160 1098 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 MATN3O15232 486 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 SUV39H1O43463 412 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CLDN7O95471 211 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 PRLP01236 227 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CYP1A2P05177 515 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 FAM228BP0C875 321 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 SFTPCP11686 197 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 ZNF30P17039 623 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 FASLGP48023 281 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CSRP3P50461 194 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 ATP1A2P50993 1020 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 ARSEP51690 589 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 GALNT2Q10471 571 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 FIGNQ5HY92 759 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 SNAP47Q5SQN1 464 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 ANKS6Q68DC2 871 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 NCBP2-AS2Q69YL0 99 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 ZNF765Q7L2R6 523 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CHST15Q7LFX5 561 aaPredicted RBP11.29□□□□□ -0.6
SIL1-208ENST00000505945 FAM129CQ86XR2 697 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CPNE8Q86YQ8 564 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 SFRP1Q8N474 314 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CCDC112Q8NEF3 446 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 ARRDC2Q8TBH0 407 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 FAM71BQ8TC56 605 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 MAML1Q92585 1016 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 AHCYL2Q96HN2 611 aaKnown RBP11.29□□□□□ -0.6
SIL1-208ENST00000505945 COX14Q96I36 57 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 DPYSL5Q9BPU6 564 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 FUCA2Q9BTY2 467 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 DDA1Q9BW61 102 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 ZMYND15Q9H091 742 aa11.29□□□□□ -0.6
SIL1-208ENST00000505945 RCOR3Q9P2K3 495 aaPredicted RBP11.29□□□□□ -0.6
SIL1-208ENST00000505945 CNOT6Q9ULM6 557 aaKnown RBP11.29□□□□□ -0.6
SIL1-208ENST00000505945 BZW2Q9Y6E2 419 aaKnown RBP11.29□□□□□ -0.6
SIL1-208ENST00000505945 OAS3Q9Y6K5 1087 aaKnown RBP11.29□□□□□ -0.6
SIL1-208ENST00000505945 ZFC3H1O60293 1989 aaKnown RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 EFCAB7A8K855 629 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 B4E171 279 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 DNAJC6O75061 913 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 PYGLP06737 847 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 LIFP15018 202 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 CES1P23141 567 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 CCNCP24863 283 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 GJC1P36383 396 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 TSPAN7P41732 249 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 GPLD1P80108 840 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 NIPAL4Q0D2K0 466 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 NFATC2Q13469 925 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 LRP8Q14114 963 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms