RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 FMO4P31512 558 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 BTKQ06187 659 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PEX6Q13608 980 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZDHHC20Q5W0Z9 365 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 APCDD1Q8J025 514 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 GRIN3AQ8TCU5 1115 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 WFDC5Q8TCV5 224 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 JADE3Q92613 823 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PTERQ96BW5 349 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PDLIM5Q96HC4 596 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 BIRC8Q96P09 236 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 THTPAQ9BU02 230 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC46A2Q9BY10 475 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PFDN4Q9NQP4 134 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 ATP4BP51164 291 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 XIAPP98170 497 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 ELMSAN1Q6PJG2 1045 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CHSY3Q70JA7 882 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 PLPP6Q8IY26 295 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CMTM8Q8IZV2 173 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CLYBLQ8N0X4 340 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CHCHD4Q8N4Q1 142 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 AGR3Q8TD06 166 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 LMLNQ96KR4 655 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 SERPINI1Q99574 410 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZFYVE1Q9HBF4 777 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CYP4F12Q9HCS2 524 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC25A13Q9UJS0 675 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 RNF112Q9ULX5 631 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 NEMP2A6NFY4 417 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CAPN8A6NHC0 703 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 SDHDO14521 159 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 PRMT5O14744 637 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 KLK8O60259 260 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 XYLBO75191 536 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 FKBP6O75344 327 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 SUPT7LO94864 414 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 HSPA1AP0DMV8 641 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 HSPA1BP0DMV9 641 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZNF7P17097 686 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 ITGALP20701 1170 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 KCNA5P22460 613 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 EPHA3P29320 983 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 IL2P60568 153 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CYLC2Q14093 348 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 PDCD2Q16342 344 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 GPR33Q49SQ1 333 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 ATXN7L2Q5T6C5 722 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 GRAMD4Q6IC98 578 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 PCDH20Q8N6Y1 951 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 PHF21BQ96EK2 531 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 CPEB1Q9BZB8 566 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 MTIF3Q9H2K0 278 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZBTB26Q9HCK0 441 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 MAN1C1Q9NR34 630 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 TLR9Q9NR96 1032 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 PPIL1Q9Y3C6 166 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 TRAF6Q9Y4K3 522 aa17.19■□□□□ 0.34
TRAPPC11-204ENST00000505676 HELZP42694 1942 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 VPS4BO75351 444 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 ANP32DO95626 131 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 ACTR3P61158 418 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 SQLEQ14534 574 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 KPNB1Q14974 876 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 UNC50Q53HI1 259 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 PITRM1Q5JRX3 1037 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 NXNQ6DKJ4 435 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 AAGABQ6PD74 315 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 PAQR3Q6TCH7 311 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 SNX20Q7Z614 316 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 RBFAQ8N0V3 343 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 PHTF2Q8N3S3 785 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 PTGR2Q8N8N7 351 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 P2RY12Q9H244 342 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 WDR55Q9H6Y2 383 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 C15orf41Q9Y2V0 281 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 MED16Q9Y2X0 877 aa17.18■□□□□ 0.34
TRAPPC11-204ENST00000505676 E5RI56 91 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 NEMP1O14524 444 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 ENTPD5O75356 428 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 GFAPP14136 432 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 GM2AP17900 193 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 GNAZP19086 355 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 CTNNB1P35222 781 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 PDE12Q6L8Q7 609 aaKnown RBP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 PSAPL1Q6NUJ1 521 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 PELI3Q8N2H9 469 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 FBXO39Q8N4B4 442 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 SHKBP1Q8TBC3 707 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 HERVK_113Q902F9 699 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZNF641Q96N77 438 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 GPR21Q99679 349 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 SLC2A11Q9BYW1 496 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 UNKQ9C0B0 810 aaKnown RBP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 STX18Q9P2W9 335 aaKnown RBP17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 BCAP29Q9UHQ4 241 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 GNPTGQ9UJJ9 305 aa17.17■□□□□ 0.34
TRAPPC11-204ENST00000505676 ANGPTL2Q9UKU9 493 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms