RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 HAO2Q9NYQ3 351 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 FOXJ2Q9P0K8 574 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 DNAJB9Q9UBS3 223 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 LIPT1Q9Y234 373 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 RAP2CQ9Y3L5 183 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC4A4Q9Y6R1 1079 aa3.93□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC22A23A1A5C7 686 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 OR6C76A6NM76 312 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 TARM1B6A8C7 271 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 H0YIN7 160 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 RHODO00212 210 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 IKBKBO14920 756 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 PLRG1O43660 514 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 KLK8O60259 260 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SIX3O95343 332 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 BCL10O95999 233 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 PENKP01210 267 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 MT-ND3P03897 115 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 MYZAPP0CAP1 466 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 VPREB1P12018 145 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SRCP12931 536 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 ENO3P13929 434 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 CD58P19256 250 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 CHATP28329 748 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 HOXC9P31274 260 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SIRPAP78324 504 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 AP1B1Q10567 949 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 TUBB2AQ13885 445 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 NFE2L1Q14494 772 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF169Q14929 603 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SOWAHAQ2M3V2 549 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 TYSND1Q2T9J0 566 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 ESCO2Q56NI9 601 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 FBXO46Q6PJ61 603 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 Q6YL49 198 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 MFN1Q8IWA4 741 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC35F3Q8IY50 421 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SLC25A41Q8N5S1 370 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 PARP16Q8N5Y8 322 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 NAT8LQ8N9F0 302 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SCCPDHQ8NBX0 429 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 CFAP61Q8NHU2 1237 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 RSPH1Q8WYR4 309 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 PTP4A1Q93096 173 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 REPS1Q96D71 796 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 MSI2Q96DH6 328 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF830Q96NB3 372 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 DACH2Q96NX9 599 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 PCGF1Q9BSM1 259 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 TUBB2BQ9BVA1 445 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 GPR88Q9GZN0 384 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 KCNK15Q9H427 330 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 MVB12BQ9H7P6 319 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 MOV10Q9HCE1 1003 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 MTMR10Q9NXD2 777 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 COQ3Q9NZJ6 369 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 HACL1Q9UJ83 578 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 LAMP3Q9UQV4 416 aa3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 EPN1Q9Y6I3 576 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 POLR2AP24928 1970 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-208ENST00000505553 KANSL1LA0AUZ9 987 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 TMEM202A6NGA9 273 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ANXA2P2A6NMY6 339 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 DDX39AO00148 427 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 DNM1LO00429 736 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 HSPB6O14558 160 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ATP2A1O14983 1001 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 SMAD9O15198 467 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 RSL1D1O76021 490 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 TOP3BO95985 862 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 GH2P01242 217 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PFKFB1P16118 471 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PRLRP16471 622 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PCGF2P35227 344 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 RARRES1P49788 294 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 WASHC5Q12768 1159 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PKP1Q13835 747 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PGM5Q15124 567 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 DLG2Q15700 870 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PNLIPRP3Q17RR3 467 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 KRTCAP3Q53RY4 240 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 C6orf163Q5TEZ5 329 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 TMEM198Q66K66 360 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 KRT39Q6A163 491 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 SIGIRRQ6IA17 410 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ALKBH5Q6P6C2 394 aaKnown RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 PQLC2Q6ZP29 291 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 LINC00696Q6ZRV3 163 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 DPPA4Q7L190 304 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 HAUS6Q7Z4H7 955 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 LDB1Q86U70 411 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 TUSC5Q8IXB3 177 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 MAML2Q8IZL2 1156 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 CNPY4Q8N129 248 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 CTCFLQ8NI51 663 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 FIBINQ8TAL6 211 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 ZNF398Q8TD17 642 aa3.91□□□□□ -1.78
TRAPPC13-208ENST00000505553 MR1Q95460 341 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms