RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PMS2P54278 862 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 GFERP55789 205 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 AP1S1P61966 158 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 PTP4A2Q12974 167 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 SQSTM1Q13501 440 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 ZNF235Q14590 738 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 LBRQ14739 615 aaKnown RBP6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 PRR30Q53SZ7 412 aaPredicted RBP6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 MIIPQ5JXC2 388 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 DPY19L2P1Q6NXN4 242 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 DNAJC24Q6P3W2 148 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 RFLNAQ6ZTI6 216 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 ARHGAP22Q7Z5H3 698 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 TSPAN33Q86UF1 283 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 RASGRP3Q8IV61 690 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 FAM114A1Q8IWE2 563 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 SFRP1Q8N474 314 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 NPWQ8N729 165 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 GALNT11Q8NCW6 608 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 STAMBPL1Q96FJ0 436 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 ZPBPQ9BS86 351 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 TUBGCP2Q9BSJ2 902 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 TBC1D10AQ9BXI6 508 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 NAA15Q9BXJ9 866 aaKnown RBP6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 STK33Q9BYT3 514 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 SPRY4Q9C004 299 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 TWSG1Q9GZX9 223 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 VPS16Q9H269 839 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 DHX35Q9H5Z1 703 aaKnown RBP6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 NLRC4Q9NPP4 1024 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 TAB2Q9NYJ8 693 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 ADAM22Q9P0K1 906 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 CNOT8Q9UFF9 292 aaKnown RBP6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 LNPEPQ9UIQ6 1025 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 KCNK6Q9Y257 313 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
NPIPB3-203ENST00000504841 PIPSLA2A3N6 862 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 A6NCN8 305 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SOCS5O75159 536 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 KIAA0754O94854 1291 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 CALB1P05937 261 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 ACP5P13686 325 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TYRP1P17643 537 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 DESP17661 470 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 ERCC2P18074 760 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 KLK7P49862 253 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SEPHS1P49903 392 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 RENBPP51606 427 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 ZNF143P52747 638 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 POLR2FP61218 127 aaKnown RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 MAXP61244 160 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 RPL7AP62424 266 aaKnown RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SH3BP2P78314 561 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SLC10A7Q0GE19 358 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TRAF2Q12933 501 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 CHAF1BQ13112 559 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 MRPL49Q13405 166 aaKnown RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 DNASE1L3Q13609 305 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SYCP1Q15431 976 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 CA9Q16790 459 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 NADK2Q4G0N4 442 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 PYCR3Q53H96 274 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 PPP6R3Q5H9R7 873 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TMCO4Q5TGY1 634 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 CPZQ66K79 652 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 DCUN1D2Q6PH85 259 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 WDR74Q6RFH5 385 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TRIM72Q6ZMU5 477 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 USP45Q70EL2 814 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 CHST15Q7LFX5 561 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 ZNF677Q86XU0 584 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TP53INP2Q8IXH6 220 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TTC13Q8NBP0 860 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 C3orf20Q8ND61 904 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SCAMP4Q969E2 229 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 AP2M1Q96CW1 435 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SMIM14Q96QK8 99 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 OR6C1Q96RD1 312 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 PCDHB18PQ96TA0 734 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 CNPY3Q9BT09 278 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TRIM55Q9BYV6 548 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 GANQ9H2C0 597 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 FBXO8Q9NRD0 319 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 FAM207AQ9NSI2 230 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SIDT1Q9NXL6 827 aaKnown RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 DONSONQ9NYP3 566 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 PDP2Q9P2J9 529 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 ZNHIT2Q9UHR6 403 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 SRPK3Q9UPE1 567 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 PCYT1BQ9Y5K3 369 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 BSNQ9UPA5 3926 aa6.84□□□□□ -1.31
NPIPB3-203ENST00000504841 TNRC6AQ8NDV7 1962 aaKnown RBP6.84□□□□□ -1.32
NPIPB3-203ENST00000504841 COL12A1Q99715 3063 aa6.83□□□□□ -1.32
NPIPB3-203ENST00000504841 USP9YO00507 2555 aaPredicted RBP6.83□□□□□ -1.32
NPIPB3-203ENST00000504841 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.83□□□□□ -1.32
NPIPB3-203ENST00000504841 A0A1W2PQ67 120 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms