RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NDST2P52849 883 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 NOMO3P69849 1222 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 NSUN2Q08J23 767 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 CHRNA6Q15825 494 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 NAA35Q5VZE5 725 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 PAPD7Q5XG87 772 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 JMJD6Q6NYC1 403 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 MARK2Q7KZI7 788 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 GALNT13Q8IUC8 556 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 TIGD1Q96MW7 591 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 LRRC19Q9H756 370 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 LUZP4Q9P127 313 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 CNOT8Q9UFF9 292 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 LNPEPQ9UIQ6 1025 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 TMEM98Q9Y2Y6 226 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 ZDHHC9Q9Y397 364 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 PCDHGB7Q9Y5F8 929 aa15.7■□□□□ 0.1
PDLIM7-210ENST00000503827 MN1Q10571 1320 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 PRRC2CQ9Y520 2896 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 A0A1W2PQ67 120 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 GOLGA6L4A6NEF3 574 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 PSMD11O00231 422 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 FGF10O15520 208 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 EML2O95834 649 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 SLC2A4P14672 509 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 SCNN1BP51168 640 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 AP1S1P61966 158 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 CPZQ66K79 652 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 HSD11B1LQ7Z5J1 315 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 TP53INP2Q8IXH6 220 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 JOSD2Q8TAC2 188 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 CT55Q8WUE5 264 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 ELMO2Q96JJ3 720 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 C9orf72Q96LT7 481 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 ACTL8Q9H568 366 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 LHX9Q9NQ69 397 aa15.69■□□□□ 0.1
PDLIM7-210ENST00000503827 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 GOLGA6L3A6NEY3 463 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 ARHGAP42A6NI28 874 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 HNRNPRO43390 633 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 CYP2A6P11509 494 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 DPTQ07507 201 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 CHAF1BQ13112 559 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 NR6A1Q15406 480 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 UGT8Q16880 541 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 ZRANB3Q5FWF4 1079 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 SCYL2Q6P3W7 929 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 IYDQ6PHW0 289 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 Q6ZVL8 140 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 HPS6Q86YV9 775 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 CBARPQ8N350 705 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 Q8NA96 180 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 TBC1D10AQ9BXI6 508 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 ING2Q9H160 280 aa15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 G3BP2Q9UN86 482 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-210ENST00000503827 POLQO75417 2590 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 ARGFXA6NJG6 315 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 TOX3O15405 576 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 SPAG6O75602 509 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 CPP00450 1065 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 C9P02748 559 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 MMEP08473 750 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 FGF5P12034 268 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 GRNP28799 593 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 SEPHS1P49903 392 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 PAPOLAP51003 745 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 RENBPP51606 427 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 GFERP55789 205 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 SH3BP2P78314 561 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 RFTN1Q14699 578 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 CYB5D1Q6P9G0 228 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 ADAMTSL4Q6UY14 1074 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 CHST15Q7LFX5 561 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 NOP9Q86U38 636 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 PPP1R3BQ86XI6 285 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 AVL9Q8NBF6 648 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 FNIP1Q8TF40 1166 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 SPOCK2Q92563 424 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 MARVELD3Q96A59 401 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 PNPLA2Q96AD5 504 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 CELF6Q96J87 481 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 HERPUD2Q9BSE4 406 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 GPR87Q9BY21 358 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 MFRPQ9BY79 579 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 BRD8Q9H0E9 1235 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 SP110Q9HB58 689 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 TBC1D29Q9UFV1 150 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 ZNHIT2Q9UHR6 403 aa15.67■□□□□ 0.1
PDLIM7-210ENST00000503827 KIR2DS5A0A0G2JLQ3 304 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 A0A0G2JNG1 304 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 LILRA5A6NI73 299 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 KIR2DS3K7RE56 304 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 SOCS5O75159 536 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 CBX6O95503 412 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 ASMTLO95671 621 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 KRT3P12035 628 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 GPD1P21695 349 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 LHCGRP22888 699 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 MMP8P22894 467 aa15.66■□□□□ 0.1
PDLIM7-210ENST00000503827 ELOAQ14241 798 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms