RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 TMEM164Q5U3C3 297 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 H2AFVQ71UI9 128 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 GALNT13Q8IUC8 556 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 NRSN1Q8IZ57 195 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 NAGSQ8N159 534 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 CCNYQ8ND76 341 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 FAF2Q96CS3 445 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 SCARF2Q96GP6 870 aaPredicted RBP17.28■□□□□ 0.36
HDAC11-220ENST00000498532 ZNF830Q96NB3 372 aaPredicted RBP17.28■□□□□ 0.36
HDAC11-220ENST00000498532 RIOK2Q9BVS4 552 aaKnown RBP17.28■□□□□ 0.36
HDAC11-220ENST00000498532 ZMYND15Q9H091 742 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 PCDH9Q9HC56 1237 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 FOXJ2Q9P0K8 574 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 SEPT10Q9P0V9 454 aa17.28■□□□□ 0.36
HDAC11-220ENST00000498532 RPL26L1Q9UNX3 145 aaKnown RBP17.28■□□□□ 0.36
HDAC11-220ENST00000498532 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.28■□□□□ 0.36
HDAC11-220ENST00000498532 HGSO14964 777 aaPredicted RBP17.27■□□□□ 0.36
HDAC11-220ENST00000498532 INPP4BO15327 924 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 HNRNPH3P31942 346 aaKnown RBP17.27■□□□□ 0.36
HDAC11-220ENST00000498532 MAN1A1P33908 653 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 LRP8Q14114 963 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 IHHQ14623 411 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 SLC18A3Q16572 532 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 PYCR3Q53H96 274 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 USP53Q70EK8 1073 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 NLRP8Q86W28 1048 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 CCDC13Q8IYE1 715 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 PQLC3Q8N755 202 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 RCBTB1Q8NDN9 531 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 EXD1Q8NHP7 514 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 ARRDC2Q8TBH0 407 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 LRRN4Q8WUT4 740 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 USP7Q93009 1102 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 HDAC11Q96DB2 347 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 CCDC74BQ96LY2 380 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 AGAP2Q99490 1192 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 PACSIN1Q9BY11 444 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 SEMA4CQ9C0C4 833 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 DEF6Q9H4E7 631 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 PLEKHM1Q9Y4G2 1056 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 PCDHB11Q9Y5F2 797 aa17.27■□□□□ 0.36
HDAC11-220ENST00000498532 ZFC3H1O60293 1989 aaKnown RBP17.27■□□□□ 0.36
HDAC11-220ENST00000498532 SETXQ7Z333 2677 aaKnown RBP17.27■□□□□ 0.35
HDAC11-220ENST00000498532 TENM4Q6N022 2769 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 IGHV5-10-1A0A0J9YXX1 117 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 C1orf232A0A0U1RR37 186 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 C9orf172C9J069 976 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 ASMTLO95671 621 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 PRLP01236 227 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 CD1CP29017 333 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 NIPAL4Q0D2K0 466 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 RAVER1Q8IY67 606 aaKnown RBP17.26■□□□□ 0.35
HDAC11-220ENST00000498532 COX14Q96I36 57 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 LYSMD1Q96S90 227 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 XPO4Q9C0E2 1151 aaKnown RBP17.26■□□□□ 0.35
HDAC11-220ENST00000498532 KCNK4Q9NYG8 393 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 DTLQ9NZJ0 730 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 VPS18Q9P253 973 aa17.26■□□□□ 0.35
HDAC11-220ENST00000498532 FLNBO75369 2602 aaKnown RBP17.25■□□□□ 0.35
HDAC11-220ENST00000498532 KCNK1O00180 336 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 PPM1DO15297 605 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 EFSO43281 561 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 CLDN7O95471 211 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 CD82P27701 267 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 CD86P42081 329 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 PPM1FP49593 454 aaPredicted RBP17.25■□□□□ 0.35
HDAC11-220ENST00000498532 MANEAQ5SRI9 462 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 NKAIN2Q5VXU1 208 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 ZNF574Q6ZN55 896 aaPredicted RBP17.25■□□□□ 0.35
HDAC11-220ENST00000498532 ZFAND4Q86XD8 727 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 SGF29Q96ES7 293 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 MED8Q96G25 268 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 B3GNT4Q9C0J1 378 aa17.25■□□□□ 0.35
HDAC11-220ENST00000498532 BOD1L1Q8NFC6 3051 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 IGHV1OR21-1A0A087WYE8 117 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 LRRD1A4D1F6 860 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 JCHAINP01591 159 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 ATP1A1P05023 1023 aaKnown RBP17.24■□□□□ 0.35
HDAC11-220ENST00000498532 TMEM253P0C7T8 217 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 CCL4P13236 92 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 KDELR1P24390 212 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 CSF2RBP32927 897 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 LIMK2P53671 638 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 PPIDQ08752 370 aaKnown RBP17.24■□□□□ 0.35
HDAC11-220ENST00000498532 SLC10A2Q12908 348 aaPredicted RBP17.24■□□□□ 0.35
HDAC11-220ENST00000498532 SRSF6Q13247 344 aaKnown RBP17.24■□□□□ 0.35
HDAC11-220ENST00000498532 TRA2AQ13595 282 aaKnown RBP eCLIP17.24■□□□□ 0.35
HDAC11-220ENST00000498532 TRIM14Q14142 442 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 MESDQ14696 234 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 VASH2Q86V25 355 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 CCDC112Q8NEF3 446 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 OR4D9Q8NGE8 314 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 CCHCR1Q8TD31 782 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.24■□□□□ 0.35
HDAC11-220ENST00000498532 SLC37A2Q8TED4 501 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 RAPGEF5Q92565 580 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 RNF157Q96PX1 679 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 DNAJC7Q99615 494 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 DPYSL5Q9BPU6 564 aa17.24■□□□□ 0.35
HDAC11-220ENST00000498532 ADGRE3Q9BY15 652 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms