RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GAD1Q99259 594 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NDFIP1Q9BT67 221 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SF3B5Q9BWJ5 86 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PLA2G12BQ9BX93 195 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SLC17A9Q9BYT1 436 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 VCXQ9H320 206 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ACTL8Q9H568 366 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PDZD7Q9H5P4 517 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZDHHC7Q9NXF8 308 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NFKBIL1Q9UBC1 381 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 REV1Q9UBZ9 1251 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ADAMTS1Q9UHI8 967 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DUSP13Q9UII6 198 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TMEFF2Q9UIK5 374 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 USH1CQ9Y6N9 552 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 UNC13CQ8NB66 2214 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TNCP24821 2201 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CCDC168Q8NDH2 2452 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 STK36Q9NRP7 1315 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZFHX4Q86UP3 3567 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 HTR3EA5X5Y0 456 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CCDC69A6NI79 296 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 WTIPA6NIX2 430 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 NT5C1B-RDH14C9J2C7 533 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 BTN3A3O00478 584 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NEMP1O14524 444 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NPHS1O60500 1241 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CA11O75493 328 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 IL6P05231 212 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 LPLP06858 475 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SYPP08247 313 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 C1GALT1C1LP0DN25 315 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MCF2P10911 925 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PRKCAP17252 672 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NPR3P17342 541 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TNFRSF1BP20333 461 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ATP6V1C1P21283 382 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 COL8A1P27658 744 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FMO4P31512 558 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 EIF2DP41214 584 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 GSTM5P46439 218 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PITPNBP48739 271 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DSTNP60981 165 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 HERVK_113P63132 956 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ERVK-8P63133 956 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ERVK-25P63136 954 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CCNA1P78396 465 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 HDLBPQ00341 1268 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 EEF1A2Q05639 463 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 MGAT5Q09328 741 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 KCNAB2Q13303 367 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TOMM20Q15388 145 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SEC23AQ15436 765 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 LARP7Q4G0J3 582 aaKnown RBP eCLIP1.44□□□□□ -2.18
XRN1-214ENST00000498077 UNC50Q53HI1 259 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MTX3Q5HYI7 312 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SPDYCQ5MJ68 293 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 OR2G6Q5TZ20 316 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DHRS11Q6UWP2 260 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZFP2Q6ZN57 461 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 Q6ZS46 218 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MTSS1LQ765P7 747 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 YTHDF3Q7Z739 585 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 MRPL55Q7Z7F7 128 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 KIAA1328Q86T90 577 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TMEM135Q86UB9 458 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MCATQ8IVS2 390 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SERPINA12Q8IW75 414 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MFSD6LQ8IWD5 586 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 ZNF100Q8IYN0 542 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CRACR2BQ8N4Y2 399 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 CSNK1A1LQ8N752 337 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 OR10AD1Q8NGE0 317 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 OR51D1Q8NGF3 324 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RFESDQ8TAC1 157 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 VSTM2AQ8TAG5 236 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 RPS4Y2Q8TD47 263 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 KBTBD7Q8WVZ9 684 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 SLC9A6Q92581 669 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 PTP4A1Q93096 173 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TIFAQ96CG3 184 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 BSCL2Q96G97 398 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 PLEKHA8Q96JA3 519 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FAM167AQ96KS9 214 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TEFMQ96QE5 360 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 TSPAN32Q96QS1 320 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NR1H4Q96RI1 486 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 SERPINI1Q99574 410 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 FDXACB1Q9BRP7 624 aaPredicted RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 ERVK-6Q9BXR3 956 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 CAPS2Q9BXY5 557 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 DSN1Q9H410 356 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 UNKLQ9H9P5 680 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 BPIFA1Q9NP55 256 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 TRMT1Q9NXH9 659 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 MYEF2Q9P2K5 600 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 CDH9Q9ULB4 789 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 NOL7Q9UMY1 257 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 GABRQQ9UN88 632 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 MRPS17Q9Y2R5 130 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms