RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HS3ST3A1Q9Y663 406 aa19.97■□□□□ 0.79
CTSD-206ENST00000497544 FPGTO14772 594 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 RAD51BO15315 384 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 LDB2O43679 373 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 PPFIA2O75334 1257 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 GNSP15586 552 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 ARL4CP56559 192 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 TRADDQ15628 312 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 SKIDA1Q1XH10 827 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 CCDC38Q502W7 563 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 DNAJC21Q5F1R6 531 aaKnown RBP19.96■□□□□ 0.79
CTSD-206ENST00000497544 CASC4Q6P4E1 433 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 NLRP9Q7RTR0 991 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 TP53I13Q8NBR0 393 aaPredicted RBP19.96■□□□□ 0.79
CTSD-206ENST00000497544 OR4K2Q8NGD2 314 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 AP2M1Q96CW1 435 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 KLF6Q99612 283 aaPredicted RBP19.96■□□□□ 0.79
CTSD-206ENST00000497544 CDH19Q9H159 772 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 GRHL1Q9NZI5 618 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 PI4KAP42356 2102 aa19.96■□□□□ 0.79
CTSD-206ENST00000497544 BPTFQ12830 3046 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 ESYT3A0FGR9 886 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 MAGEB16A2A368 324 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 CCDC78A2IDD5 438 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 PCCBP05166 539 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 ZNF806P0C7X5 589 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 BPIP17213 487 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 HADHAP40939 763 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 NOVA1P51513 510 aaKnown RBP19.95■□□□□ 0.78
CTSD-206ENST00000497544 RACK1P63244 317 aaKnown RBP19.95■□□□□ 0.78
CTSD-206ENST00000497544 CRADDP78560 199 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 TMPRSS15P98073 1019 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 PTPRCAPQ14761 206 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 IRF4Q15306 451 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 ZNF765Q7L2R6 523 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 NLRP8Q86W28 1048 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 SYT12Q8IV01 421 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 GPR26Q8NDV2 337 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 ART4Q93070 314 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 SCAMP4Q969E2 229 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 ORAI3Q9BRQ5 295 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 MBNL1Q9NR56 388 aaKnown RBP19.95■□□□□ 0.78
CTSD-206ENST00000497544 SYBUQ9NX95 663 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 SAMD15Q9P1V8 674 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 SUSD2Q9UGT4 822 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 FNDC3AQ9Y2H6 1198 aaKnown RBP19.95■□□□□ 0.78
CTSD-206ENST00000497544 TCAF1Q9Y4C2 921 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 MAD1L1Q9Y6D9 718 aa19.95■□□□□ 0.78
CTSD-206ENST00000497544 MYLKQ15746 1914 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 MROH6A6NGR9 719 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 BCAT2O15382 392 aaPredicted RBP19.94■□□□□ 0.78
CTSD-206ENST00000497544 SPAM1P38567 509 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 MAGEA3P43357 314 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 GPR1P46091 355 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 ZNF140P52738 457 aaPredicted RBP19.94■□□□□ 0.78
CTSD-206ENST00000497544 CLDN2P57739 230 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 DPTQ07507 201 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 HIF1AQ16665 826 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 BBS9Q3SYG4 887 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 FNBP1LQ5T0N5 605 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 TSTD2Q5T7W7 516 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 ALS2CLQ60I27 953 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 RAET1GQ6H3X3 334 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 IFT20Q8IY31 132 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 ZCCHC9Q8N567 271 aaKnown RBP19.94■□□□□ 0.78
CTSD-206ENST00000497544 OR13C4Q8NGS5 318 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 FAM174AQ8TBP5 190 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 PTCD2Q8WV60 388 aaKnown RBP19.94■□□□□ 0.78
CTSD-206ENST00000497544 IFT81Q8WYA0 676 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 SEC14L1Q92503 715 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 DNAJC1Q96KC8 554 aaKnown RBP19.94■□□□□ 0.78
CTSD-206ENST00000497544 SLC6A18Q96N87 628 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 C19orf43Q9BQ61 176 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 RIOK2Q9BVS4 552 aaKnown RBP19.94■□□□□ 0.78
CTSD-206ENST00000497544 SCNM1Q9BWG6 230 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 SPATA16Q9BXB7 569 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 ARRDC1-AS1Q9H2J1 176 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 CHRAC1Q9NRG0 131 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 NLE1Q9NVX2 485 aaPredicted RBP19.94■□□□□ 0.78
CTSD-206ENST00000497544 PILRBQ9UKJ0 227 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 CA5BQ9Y2D0 317 aa19.94■□□□□ 0.78
CTSD-206ENST00000497544 PLXNA2O75051 1894 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 A0A1B0GTW7 788 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 TP73O15350 636 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 PYGLP06737 847 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 CD38P28907 300 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 IGFALSP35858 605 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 DCDC1P59894 354 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 DHX9Q08211 1270 aaKnown RBP19.93■□□□□ 0.78
CTSD-206ENST00000497544 HLTFQ14527 1009 aaKnown RBP eCLIP19.93■□□□□ 0.78
CTSD-206ENST00000497544 INPP5AQ14642 412 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 ARMC3Q5W041 872 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 ESRP1Q6NXG1 681 aaKnown RBP19.93■□□□□ 0.78
CTSD-206ENST00000497544 PNCKQ6P2M8 343 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 MPP5Q8N3R9 675 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 TMEM145Q8NBT3 493 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 FBXO25Q8TCJ0 367 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 SKA1Q96BD8 255 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 SIGLEC10Q96LC7 697 aa19.93■□□□□ 0.78
CTSD-206ENST00000497544 BMFQ96LC9 184 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms