RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 RARAP10276 462 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 IL1R2P27930 398 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 IQCB1Q15051 598 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 CCDC122Q5T0U0 273 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 VASH2Q86V25 355 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 GALNT13Q8IUC8 556 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 SFRP1Q8N474 314 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 AHCYL2Q96HN2 611 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 LYSMD1Q96S90 227 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC38A3Q99624 504 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 ABCG8Q9H221 673 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 SARS2Q9NP81 518 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC39A1Q9NY26 324 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 GOLGA6AQ9NYA3 693 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 SDK2Q58EX2 2172 aa16.75■□□□□ 0.27
TRAPPC3-207ENST00000497251 A0A0J9YYE9 177 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 OR5K4A6NMS3 321 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 TRBC1P01850 177 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 MAP4P27816 1152 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 UGT1A3P35503 534 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 EPHB1P54762 984 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 EPHA4P54764 986 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 PTSQ03393 145 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 HADHQ16836 314 aaKnown RBP16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 CRTC2Q53ET0 693 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 LRRC66Q68CR7 880 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 TP53INP2Q8IXH6 220 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 CACNA2D3Q8IZS8 1091 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 RCBTB1Q8NDN9 531 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 FAM71BQ8TC56 605 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 HSPH1Q92598 858 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 SYN2Q92777 582 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 ART4Q93070 314 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 IQCDQ96DY2 449 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 COX14Q96I36 57 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC45A3Q96JT2 553 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 TSGA13Q96PP4 275 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 HERPUD2Q9BSE4 406 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 PCDH18Q9HCL0 1135 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 ETNK2Q9NVF9 386 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 LCMT1Q9UIC8 334 aa16.74■□□□□ 0.27
TRAPPC3-207ENST00000497251 TTC24A2A3L6 582 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 ZNF891A8MT65 544 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 MATN3O15232 486 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 SOD1P00441 154 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 MX2P20592 715 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 CCNCP24863 283 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 GARSP41250 739 aaKnown RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 CCR10P46092 362 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 POLD2P49005 469 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 STC1P52823 247 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 MAXP61244 160 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 MC1RQ01726 317 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 SRSF6Q13247 344 aaKnown RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 KRT81Q14533 505 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 SMTNL2Q2TAL5 461 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 CEACAM20Q6UY09 585 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 TSPAN33Q86UF1 283 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 MAML1Q92585 1016 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 KIAA1143Q96AT1 154 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 SUDS3Q9H7L9 328 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 NT5MQ9NPB1 228 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 FBXO8Q9NRD0 319 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 MYO1AQ9UBC5 1043 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 ST14Q9Y5Y6 855 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 B3GALT1Q9Y5Z6 326 aa16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 UBR5O95071 2799 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC3-207ENST00000497251 KIR2DS5A0A0G2JLQ3 304 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 A0A0G2JNG1 304 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 A0A1B0GTH6 734 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 GPR89AB7ZAQ6 455 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 KIR2DS3K7RE56 304 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 MYO1FO00160 1098 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 GPR89BP0CG08 455 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 TPM4P67936 248 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 MC2RQ01718 297 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 ITKQ08881 620 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 GALNT2Q10471 571 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 KIR2DS5Q14953 304 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 PAFAH1B3Q15102 231 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 IFI16Q16666 785 aaKnown RBP16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 ARHGAP22Q7Z5H3 698 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC9B2Q86UD5 537 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 MAP7D3Q8IWC1 876 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 SLC37A2Q8TED4 501 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 PATE1Q8WXA2 126 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 HTR3CQ8WXA8 447 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 PILRAQ9UKJ1 303 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 LRRK2Q5S007 2527 aa16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 RP1L1Q8IWN7 2480 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC3-207ENST00000497251 RAD1O60671 282 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 PDHA1P08559 390 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 CTPS1P17812 591 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 WT1P19544 449 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 CSF2RBP32927 897 aa16.71■□□□□ 0.27
TRAPPC3-207ENST00000497251 ARSDP51689 593 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms