RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ZNF883P0CG24 379 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 MYCLP1P12525 358 aaPredicted RBP19.32■□□□□ 0.68
HDAC4-212ENST00000495497 NME1P15531 152 aaKnown RBP19.32■□□□□ 0.68
HDAC4-212ENST00000495497 JUNDP17535 347 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 KCNJ11Q14654 390 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 TCEA2Q15560 299 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 ALG11Q2TAA5 492 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 CCDC38Q502W7 563 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 HID1Q8IV36 788 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 PHACTR4Q8IZ21 702 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 TRAM1L1Q8N609 369 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 OR56A4Q8NGH8 313 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 OR1E3Q8WZA6 343 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 CPT1BQ92523 772 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 PDXPQ96GD0 296 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 CAMK1GQ96NX5 476 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 KRT12Q99456 494 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 SUDS3Q9H7L9 328 aaPredicted RBP19.32■□□□□ 0.68
HDAC4-212ENST00000495497 FGF22Q9HCT0 170 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 IL26Q9NPH9 171 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 EIF2B3Q9NR50 452 aaKnown RBP19.32■□□□□ 0.68
HDAC4-212ENST00000495497 RAD18Q9NS91 495 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 MOSPD1Q9UJG1 213 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 BTBD3Q9Y2F9 522 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 PKP3Q9Y446 797 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 DMXL1Q9Y485 3027 aa19.32■□□□□ 0.68
HDAC4-212ENST00000495497 CCDC188H7C350 402 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 TM4SF5O14894 197 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 GPR39O43194 453 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 SH3BP5O60239 455 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 URI1O94763 535 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-212ENST00000495497 CRTAMO95727 393 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 FUCA1P04066 466 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 TPSB2P20231 275 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 CA5AP35218 305 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 SPAM1P38567 509 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 DCDC1P59894 354 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 SRP54P61011 504 aaKnown RBP19.31■□□□□ 0.68
HDAC4-212ENST00000495497 MRPS25P82663 173 aaKnown RBP19.31■□□□□ 0.68
HDAC4-212ENST00000495497 PPARDQ03181 441 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 C2orf54Q08AI8 447 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 C1orf61Q13536 156 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 TPSAB1Q15661 275 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 ZNF648Q5T619 568 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-212ENST00000495497 FAM151BQ6UXP7 276 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 SLC25A45Q8N413 288 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 HIC2Q96JB3 615 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 PLEKHG4BQ96PX9 1271 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 FKBPLQ9UIM3 349 aa19.31■□□□□ 0.68
HDAC4-212ENST00000495497 OAS3Q9Y6K5 1087 aaKnown RBP19.31■□□□□ 0.68
HDAC4-212ENST00000495497 DCDC2BA2VCK2 349 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 GAPDHSO14556 408 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 PCDHGA12O60330 932 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A9O60656 530 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 PIAS2O75928 621 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 CEACAM5P06731 702 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 PYGLP06737 847 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A6P19224 532 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A1P22309 533 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A4P22310 534 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 DGKAP23743 735 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A3P35503 534 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A5P35504 534 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 ZNF140P52738 457 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 SESN2P58004 480 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 DR1Q01658 176 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 SLC14A1Q13336 389 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 PTK6Q13882 451 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 CHRNA6Q15825 494 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 ATP13A5Q4VNC0 1218 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 DBX2Q6ZNG2 339 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 ZNF534Q76KX8 674 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 KANSL1Q7Z3B3 1105 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 DEFB124Q8NES8 71 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 SPATA4Q8NEY3 305 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 SETD7Q8WTS6 366 aaKnown RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 SLCO2A1Q92959 643 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 COX14Q96I36 57 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 DNAJC1Q96KC8 554 aaKnown RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 TRIM51Q9BSJ1 452 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 ZSCAN5AQ9BUG6 496 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 FRMD8Q9BZ67 464 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 CDH19Q9H159 772 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A7Q9HAW7 530 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A10Q9HAW8 530 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 UGT1A8Q9HAW9 530 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 CYP4F12Q9HCS2 524 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 NFKBIL1Q9UBC1 381 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 APOBEC3BQ9UH17 382 aaKnown RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 TMPRSS11EQ9UL52 423 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 PCDHGB2Q9Y5G2 931 aa19.3■□□□□ 0.68
HDAC4-212ENST00000495497 TP53BP1Q12888 1972 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-212ENST00000495497 GLYATL1P3A0A0U1RQE8 302 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 YKT6O15498 198 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 TTI1O43156 1089 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 TMEM63AO94886 807 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 ASMTLO95671 621 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 CELA2BP08218 269 aaPredicted RBP19.29■□□□□ 0.68
HDAC4-212ENST00000495497 KELP23276 732 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 ADCY8P40145 1251 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms