RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZNF711Q9Y462 761 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 ACTL7AQ9Y615 435 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 WDR87Q6ZQQ6 2873 aa10.24□□□□□ -0.77
HDAC3-214ENST00000495485 SPAG17Q6Q759 2223 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 PIEZO1Q92508 2521 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CCDC162PA2VCL2 907 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 KRBA1A5PL33 1030 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 H3BMM5 538 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 S1PR4O95977 384 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 PDHA1P08559 390 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ARSAP15289 507 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CD9P21926 228 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 XPAP23025 273 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-214ENST00000495485 HLA-FP30511 346 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 SERPINB5P36952 375 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 SKIV2L2P42285 1042 aaKnown RBP10.23□□□□□ -0.77
HDAC3-214ENST00000495485 PTGER3P43115 390 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 STC1P52823 247 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CACNG1Q06432 222 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CCDC15Q0P6D6 951 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ACAP2Q15057 778 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 DLG2Q15700 870 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 TYSND1Q2T9J0 566 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 FUT11Q495W5 492 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ZRANB3Q5FWF4 1079 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ATXN7L2Q5T6C5 722 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-214ENST00000495485 HECTD2Q5U5R9 776 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 GRAMD4Q6IC98 578 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 BRAT1Q6PJG6 821 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 C6orf89Q6UWU4 347 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CDHR3Q6ZTQ4 885 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 OTOAQ7RTW8 1153 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CLEC14AQ86T13 490 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 SLC22A9Q8IVM8 553 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ETFBKMTQ8IXQ9 262 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CBARPQ8N350 705 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-214ENST00000495485 AFAP1L2Q8N4X5 818 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 KDM1BQ8NB78 822 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 MDGA1Q8NFP4 955 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 OR13C4Q8NGS5 318 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ZFYVE19Q96K21 471 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 LMLNQ96KR4 655 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 OMDQ99983 421 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 HEPHQ9BQS7 1158 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 WWP1Q9H0M0 922 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 MRPL46Q9H2W6 279 aaKnown RBP10.23□□□□□ -0.77
HDAC3-214ENST00000495485 SUV39H2Q9H5I1 410 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ZFYVE1Q9HBF4 777 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 TMEM216Q9P0N5 145 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 CA14Q9ULX7 337 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 ERVW-1Q9UQF0 538 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 PPIL1Q9Y3C6 166 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 PCDHB1Q9Y5F3 818 aa10.23□□□□□ -0.77
HDAC3-214ENST00000495485 WDFY4Q6ZS81 3184 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 A0A0J9YYE9 177 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 C1orf232A0A0U1RR37 186 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 FAM170BA6NMN3 283 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 WASH3PC4AMC7 463 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 SLCO1B7G3V0H7 640 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 STK25O00506 426 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 TRAFD1O14545 582 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 HNRNPCL1O60812 293 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 VPS26AO75436 327 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 SRP72O76094 671 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 MT-CO1P00395 513 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 TRBC1P01850 177 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 PIRTP0C851 137 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 ZNF30P17039 623 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 ZNF7P17097 686 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 ITGALP20701 1170 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 GABRB3P28472 473 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 MC4RP32245 332 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 SLC1A6P48664 564 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 NUMBP49757 651 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 RASSF2P50749 326 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 ARFIP2P53365 341 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 ADARP55265 1226 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 MRPS21P82921 87 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 CCINQ13939 588 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 IHHQ14623 411 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 SMAD1Q15797 465 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 GPR33Q49SQ1 333 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 PPM1JQ5JR12 505 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 SPDYAQ5MJ70 313 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 LIPMQ5VYY2 423 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 TRIM68Q6AZZ1 485 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 LRRC8EQ6NSJ5 796 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 C16orf46Q6P387 395 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 CNSTQ6PJW8 725 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 GDPD4Q6W3E5 623 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 TAS2R42Q7RTR8 314 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 CAMK1DQ8IU85 385 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 HOMEZQ8IX15 550 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 NKAPQ8N5F7 415 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 PIH1D2Q8WWB5 315 aa10.22□□□□□ -0.77
HDAC3-214ENST00000495485 RPL10LQ96L21 214 aaKnown RBP10.22□□□□□ -0.77
HDAC3-214ENST00000495485 LRRC37BQ96QE4 947 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms