RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TIPARPQ7Z3E1 657 aaKnown RBP14.16□□□□□ -0.14
VARS-228ENST00000495010 ARHGAP22Q7Z5H3 698 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 SLC9B2Q86UD5 537 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 TSPAN33Q86UF1 283 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 TRIM74Q86UV6 250 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 CBARPQ8N350 705 aaPredicted RBP14.16□□□□□ -0.14
VARS-228ENST00000495010 SFRP1Q8N474 314 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 ESX1Q8N693 406 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 CLEC18CQ8NCF0 446 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 ENOX1Q8TC92 643 aaKnown RBP14.16□□□□□ -0.14
VARS-228ENST00000495010 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.16□□□□□ -0.14
VARS-228ENST00000495010 SPRY4Q9C004 299 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 ABCG8Q9H221 673 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 SIK3Q9Y2K2 1263 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 TMEM184BQ9Y519 407 aaPredicted RBP14.16□□□□□ -0.14
VARS-228ENST00000495010 TMCO5BA8MYB1 307 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 MKRN2OSH3BPM6 223 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 H3BRJ5 948 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 INPP4BO15327 924 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 PGLSO95336 258 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 MIPP30301 263 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 ARL4AP40617 200 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 EPHB1P54762 984 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 MAXP61244 160 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 FOXM1Q08050 763 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 ITKQ08881 620 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.15□□□□□ -0.14
VARS-228ENST00000495010 MARC1Q5VT66 337 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 LRRC66Q68CR7 880 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 TMCO3Q6UWJ1 677 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 CHST15Q7LFX5 561 aaPredicted RBP14.15□□□□□ -0.14
VARS-228ENST00000495010 TECPR1Q7Z6L1 1165 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 PSTKQ8IV42 348 aaKnown RBP14.15□□□□□ -0.14
VARS-228ENST00000495010 TP53INP2Q8IXH6 220 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 EXD1Q8NHP7 514 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 MIB2Q96AX9 1013 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 MCCC1Q96RQ3 725 aaPredicted RBP14.15□□□□□ -0.14
VARS-228ENST00000495010 PEBP4Q96S96 227 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 MGME1Q9BQP7 344 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 APMAPQ9HDC9 416 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 SARS2Q9NP81 518 aaKnown RBP14.15□□□□□ -0.14
VARS-228ENST00000495010 CWC15Q9P013 229 aaKnown RBP14.15□□□□□ -0.14
VARS-228ENST00000495010 CNOT8Q9UFF9 292 aaKnown RBP14.15□□□□□ -0.14
VARS-228ENST00000495010 TP53TG5Q9Y2B4 290 aa14.15□□□□□ -0.14
VARS-228ENST00000495010 MTSS1O43312 755 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 SNX2O60749 519 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 FERP16591 822 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 ZNF30P17039 623 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 DLSTP36957 453 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 STAT5AP42229 794 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 MMP13P45452 471 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 EPHA4P54764 986 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 UBXN1Q04323 297 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 DPYSQ14117 519 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 MAP7Q14244 749 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 PTPRRQ15256 657 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 CRTC2Q53ET0 693 aaPredicted RBP14.14□□□□□ -0.15
VARS-228ENST00000495010 ATP1A1-AS1Q5TC04 95 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 CDKAL1Q5VV42 579 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 PLXDC1Q8IUK5 500 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 PGBD5Q8N414 524 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 ATPAF2Q8N5M1 289 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 SCAMP4Q969E2 229 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 PSMG3-AS1Q96PY0 264 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 HERPUD2Q9BSE4 406 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 ULBP3Q9BZM4 244 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 EPB41L1Q9H4G0 881 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 RPS6KL1Q9Y6S9 549 aa14.14□□□□□ -0.15
VARS-228ENST00000495010 A0A0U1RQS6 177 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 ATMINO43313 823 aaPredicted RBP14.13□□□□□ -0.15
VARS-228ENST00000495010 VPS4BO75351 444 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 DLGAP3O95886 979 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 SOD1P00441 154 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 CDH6P55285 790 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 PLEKHA7Q6IQ23 1121 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 IYDQ6PHW0 289 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 C6orf15Q6UXA7 325 aaPredicted RBP14.13□□□□□ -0.15
VARS-228ENST00000495010 RFLNAQ6ZTI6 216 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 ZNF765Q7L2R6 523 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 NLRP8Q86W28 1048 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 CCDC13Q8IYE1 715 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 ARFGAP1Q8N6T3 406 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 AVL9Q8NBF6 648 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 PIH1D2Q8WWB5 315 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 RIOK2Q9BVS4 552 aaKnown RBP14.13□□□□□ -0.15
VARS-228ENST00000495010 NT5MQ9NPB1 228 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 PRDM8Q9NQV8 689 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 TAS2R14Q9NYV8 317 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 VPS18Q9P253 973 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 DNPEPQ9ULA0 475 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 VPS4AQ9UN37 437 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 POLHQ9Y253 713 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 KCNK6Q9Y257 313 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 PPIL1Q9Y3C6 166 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 PRKAB1Q9Y478 270 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 MRPS18BQ9Y676 258 aaKnown RBP14.13□□□□□ -0.15
VARS-228ENST00000495010 KCNMB2Q9Y691 235 aa14.13□□□□□ -0.15
VARS-228ENST00000495010 BSNQ9UPA5 3926 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms