RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GM2AP17900 193 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 BGNP21810 368 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 MC4RP32245 332 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CA5AP35218 305 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 SERPINB5P36952 375 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 NNMTP40261 264 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 GRIA2P42262 883 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 SKIV2L2P42285 1042 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 ABCG1P45844 678 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 KCNC1P48547 511 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 SPINT3P49223 89 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CDKN1CP49918 316 aaPredicted RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 HNRNPH2P55795 449 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 DCDC1P59894 354 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 NFKB2Q00653 900 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PFKPQ01813 784 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PPARDQ03181 441 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CCDC15Q0P6D6 951 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 GALNT1Q10472 559 aaPredicted RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 NFATC2Q13469 925 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 HTR4Q13639 388 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ADGRE1Q14246 886 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CRY1Q16526 586 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PREPLQ4J6C6 727 aaPredicted RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 ZNF805Q5CZA5 627 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 TECRLQ5HYJ1 363 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 AARS2Q5JTZ9 985 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 CTSL3PQ5NE16 218 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 LYPLAL1Q5VWZ2 237 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 FAM91A1Q658Y4 838 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ATG16L1Q676U5 607 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CES5AQ6NT32 575 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PSAPL1Q6NUJ1 521 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PARM1Q6UWI2 310 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 Q6ZVU0 165 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 GET4Q7L5D6 327 aaPredicted RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 SPATA21Q7Z572 469 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 RASGRP3Q8IV61 690 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 NUDCD3Q8IVD9 361 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 C10orf107Q8IVU9 208 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CACNA2D3Q8IZS8 1091 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 STK40Q8N2I9 435 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CPA6Q8N4T0 437 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PNPLA1Q8N8W4 532 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CCDC197Q8NCU1 140 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 GPR26Q8NDV2 337 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 OR6K2Q8NGY2 324 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 KCNV2Q8TDN2 545 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PDCD6IPQ8WUM4 868 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 HEXDCQ8WVB3 486 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ANKRD49Q8WVL7 239 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 C10orf82Q8WW14 230 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 SORCS1Q8WY21 1168 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CCT6BQ92526 530 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 FGF14Q92915 247 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 NXNL1Q96CM4 212 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ZFYVE19Q96K21 471 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 SORT1Q99523 831 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ELAC2Q9BQ52 826 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 SIKE1Q9BRV8 207 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 RPP25Q9BUL9 199 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 MECRQ9BV79 373 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 TSSK1BQ9BXA7 367 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 C1QTNF3Q9BXJ4 246 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 IQCGQ9H095 443 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 MRPL46Q9H2W6 279 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 KDM4CQ9H3R0 1056 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 TFB2MQ9H5Q4 396 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 POLR3BQ9NW08 1133 aaPredicted RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 IL36AQ9UHA7 158 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 MID2Q9UJV3 735 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 TMPRSS11EQ9UL52 423 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 RUVBL2Q9Y230 463 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 ARL2BPQ9Y2Y0 163 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 PKP3Q9Y446 797 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 ZNF106Q9H2Y7 1883 aaKnown RBP6.76□□□□□ -1.33
MSH5-217ENST00000494458 ANKRD36A6QL64 1941 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 KIAA1549LQ6ZVL6 1849 aa6.76□□□□□ -1.33
MSH5-217ENST00000494458 CDH23Q9H251 3354 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PRRC2BQ5JSZ5 2229 aaKnown RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 C1orf232A0A0U1RR37 186 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 EDDM13A0A1B0GTR0 161 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 CCT8L1PA6NM43 557 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 UPK3BL1B0FP48 263 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 TMEM114B3SHH9 223 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 C10orf142B7Z368 130 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 UPK3BL2E5RIL1 263 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PSMD11O00231 422 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 LCE2BO14633 110 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PFDN6O15212 129 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 DLX3O60479 287 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 DNAJC6O75061 913 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 UGT2B4P06133 528 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 RBP1P09455 135 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 C1SP09871 688 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 LTA4HP09960 611 aaKnown RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 PRSS56P0CW18 603 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 MTHFD2P13995 350 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PKMP14618 531 aaKnown RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 CD1DP15813 335 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms