RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ADCK2Q7Z695 626 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 CENPVQ7Z7K6 275 aaPredicted RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 LDB1Q86U70 411 aaPredicted RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 UNC45BQ8IWX7 931 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 CCAR2Q8N163 923 aaKnown RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SCCPDHQ8NBX0 429 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 KCNE4Q8WWG9 221 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SNX21Q969T3 373 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SARAFQ96BY9 339 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 FERMT1Q9BQL6 677 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 MGME1Q9BQP7 344 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SH2D3AQ9BRG2 576 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 B3GNT4Q9C0J1 378 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 GPR88Q9GZN0 384 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 TMPRSS5Q9H3S3 457 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 CNOT10Q9H9A5 744 aaKnown RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 EPB41L5Q9HCM4 733 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 HINT3Q9NQE9 182 aaKnown RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 CWC25Q9NXE8 425 aaPredicted RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 DDX43Q9NXZ2 648 aaKnown RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 TAS2R14Q9NYV8 317 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 DNAJB4Q9UDY4 337 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 DDX25Q9UHL0 483 aaKnown RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 ING1Q9UK53 422 aaPredicted RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 TLK1Q9UKI8 766 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 WBP11Q9Y2W2 641 aaKnown RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 NFE2L3Q9Y4A8 694 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 PCDHGA5Q9Y5G8 931 aa4.23□□□□□ -1.73
CMSS1-207ENST00000494412 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.23□□□□□ -1.73
CMSS1-207ENST00000494412 KANSL1LA0AUZ9 987 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 CPED1A4D0V7 1026 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 CGB1A6NKQ9 187 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 OR6C76A6NM76 312 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 STMND1H3BQB6 276 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 AKAP8O43823 692 aaKnown RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 SYNCRIPO60506 623 aaKnown RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 FZD7O75084 574 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 KCNK5O95279 499 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 CYC1P08574 325 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 VPREB1P12018 145 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 ENO3P13929 434 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 SP100P23497 879 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 CHATP28329 748 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 ACVRL1P37023 503 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 MMP14P50281 582 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 BMXP51813 675 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 CAPZA1P52907 286 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 TUBA4AP68366 448 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 YWHAHQ04917 246 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 C6orf10Q5SRN2 563 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 HEPHL1Q6MZM0 1159 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 IYDQ6PHW0 289 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 ZNF793Q6ZN11 406 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 FAM43BQ6ZT52 329 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 ARHGEF25Q86VW2 580 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 SFTPA2Q8IWL1 248 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 MB21D2Q8IYB1 491 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 FBXO39Q8N4B4 442 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 NAT8LQ8N9F0 302 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 OR10S1Q8NGN2 331 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 MOSPD2Q8NHP6 518 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 GRK7Q8WTQ7 553 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 TMEM18Q96B42 140 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 DDOQ99489 341 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 SYT17Q9BSW7 474 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 MMADHCQ9H3L0 296 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 KCNK15Q9H427 330 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 CHMP1AQ9HD42 196 aaPredicted RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 LARSQ9P2J5 1176 aaKnown RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 OR14J1Q9UGF5 321 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 RCOR1Q9UKL0 485 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 ISY1Q9ULR0 285 aaKnown RBP4.22□□□□□ -1.73
CMSS1-207ENST00000494412 KLHL20Q9Y2M5 609 aa4.22□□□□□ -1.73
CMSS1-207ENST00000494412 A4D1N5 150 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 H0YIN7 160 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 SMAD9O15198 467 aaKnown RBP4.21□□□□□ -1.74
CMSS1-207ENST00000494412 FMO6PO60774 539 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 CELF2O95319 508 aaKnown RBP4.21□□□□□ -1.74
CMSS1-207ENST00000494412 SLPIP03973 132 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 MYZAPP0CAP1 466 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 UBA1P22314 1058 aaKnown RBP4.21□□□□□ -1.74
CMSS1-207ENST00000494412 HOXC9P31274 260 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 HSPA4P34932 840 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 TCF7P36402 384 aaPredicted RBP4.21□□□□□ -1.74
CMSS1-207ENST00000494412 AVPR1AP37288 418 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 PPP3CCP48454 512 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 CDH12P55289 794 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 NEDD9Q14511 834 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 ZNF273Q14593 569 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 SMTNL2Q2TAL5 461 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 FAM98BQ52LJ0 330 aaKnown RBP4.21□□□□□ -1.74
CMSS1-207ENST00000494412 PLEKHA7Q6IQ23 1121 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 PLBD1Q6P4A8 553 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 TEX38Q6PEX7 206 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 MTSS1LQ765P7 747 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 ZNF627Q7L945 461 aa4.21□□□□□ -1.74
CMSS1-207ENST00000494412 CCDC190Q86UF4 302 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms