RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 GLYATL1P3A0A0U1RQE8 302 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 A8MX80 341 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 PRPF4O43172 522 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■■■■■ 32.4
VPS52-220ENST00000493674 TYROBPO43914 113 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 RNASEH1O60930 286 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 SRP72O76094 671 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 HAUS5O94927 633 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 PRAMEF1O95521 474 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 PRSS56P0CW18 603 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 KRT15P19012 456 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 CD72P21854 359 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 XPAP23025 273 aaPredicted RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 TARSP26639 723 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 CA5AP35218 305 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 CLCN5P51795 746 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 SLC18A1P54219 525 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ADARP55265 1226 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 PPP2R2AP63151 447 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ZXDAP98168 799 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ZBTB16Q05516 673 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 NFATC2Q13469 925 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ARHGEF7Q14155 803 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ZKSCAN8Q15776 578 aaPredicted RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 GPR33Q49SQ1 333 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 FASTKD1Q53R41 847 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 HENMT1Q5T8I9 393 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 MROH9Q5TGP6 573 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 FBXL19Q6PCT2 694 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 CNSTQ6PJW8 725 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 TMEM92Q6UXU6 159 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 RFLNAQ6ZTI6 216 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ZNF765Q7L2R6 523 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 SNX20Q7Z614 316 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 SRRM1Q8IYB3 904 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 NRSN1Q8IZ57 195 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 DCLK2Q8N568 766 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ACVR1CQ8NER5 493 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 ACMSDQ8TDX5 336 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 LPGAT1Q92604 370 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 EDAQ92838 391 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 LTB4R2Q9NPC1 389 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 DYRK4Q9NR20 520 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 FBXO6Q9NRD1 293 aaPredicted RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 RAD18Q9NS91 495 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 SMOXQ9NWM0 555 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 PKD2L2Q9NZM6 624 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 TXNDC16Q9P2K2 825 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 SERGEFQ9UGK8 458 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 MTO1Q9Y2Z2 717 aaKnown RBP12.6□□□□□ -0.39
VPS52-220ENST00000493674 FADS3Q9Y5Q0 445 aa12.6□□□□□ -0.39
VPS52-220ENST00000493674 IGLV3-16A0A075B6K0 115 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 WISP3O95389 354 aaPredicted RBP12.59□□□□□ -0.39
VPS52-220ENST00000493674 ELFN1P0C7U0 828 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 ITGALP20701 1170 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 ABCG1P45844 678 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 TTPAP49638 278 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 LIG3P49916 1009 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 CDKN1CP49918 316 aaPredicted RBP12.59□□□□□ -0.39
VPS52-220ENST00000493674 SERPINB8P50452 374 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 SIGLEC14Q08ET2 396 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 LRRC32Q14392 662 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 AGERQ15109 404 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 CHRNA6Q15825 494 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 AARS2Q5JTZ9 985 aaKnown RBP12.59□□□□□ -0.39
VPS52-220ENST00000493674 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
VPS52-220ENST00000493674 ZNF549Q6P9A3 640 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 FAM151BQ6UXP7 276 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 LDB1Q86U70 411 aaPredicted RBP12.59□□□□□ -0.39
VPS52-220ENST00000493674 PNPLA1Q8N8W4 532 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 BANPQ8N9N5 519 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 ALKBH8Q96BT7 664 aaKnown RBP12.59□□□□□ -0.39
VPS52-220ENST00000493674 DTD2Q96FN9 168 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 TMPRSS11EQ9UL52 423 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 NDRG2Q9UN36 371 aaKnown RBP12.59□□□□□ -0.39
VPS52-220ENST00000493674 VPS9D1Q9Y2B5 631 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 ZDBF2Q9HCK1 2354 aa12.59□□□□□ -0.39
VPS52-220ENST00000493674 FAM95CA0A1B0GW59 222 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 KANSL1LA0AUZ9 987 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 TPP1O14773 563 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 GPR39O43194 453 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 TSPAN6O43657 245 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 MT-ND3P03897 115 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 BRAFP15056 766 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 KRT4P19013 534 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 CD9P21926 228 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 ETV3P41162 512 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.4
VPS52-220ENST00000493674 MPP2Q14168 576 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 CRY1Q16526 586 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 DBN1Q16643 649 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 RBM20Q5T481 1227 aaKnown RBP12.58□□□□□ -0.4
VPS52-220ENST00000493674 CERS6Q6ZMG9 384 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 Q6ZS52 159 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 Q6ZVL8 140 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
VPS52-220ENST00000493674 SDCCAG8Q86SQ7 713 aaPredicted RBP12.58□□□□□ -0.4
VPS52-220ENST00000493674 CLEC14AQ86T13 490 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms