RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 GOLGA6CA6NDK9 693 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 GOLGA6BA6NDN3 693 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 LILRA5A6NI73 299 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 EIF3CLB5ME19 914 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 C21orf140B9A014 251 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 TOX3O15405 576 aaPredicted RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 CCP110O43303 1012 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 CLDN1O95832 211 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 EML2O95834 649 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 CPP00450 1065 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 C9P02748 559 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 PYGLP06737 847 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 GOLGA6DP0CG33 693 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC2A4P14672 509 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 ZNF28P17035 718 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 VARSP26640 1264 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 GARSP41250 739 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 GPR1P46091 355 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 PGDP52209 483 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 ZNF143P52747 638 aaPredicted RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 FMO1Q01740 532 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 IL10RBQ08334 325 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 MIIPQ5JXC2 388 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 Q6ZVL8 140 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 TECPR1Q7Z6L1 1165 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 TMEM135Q86UB9 458 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC9B2Q86UD5 537 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 NLRP8Q86W28 1048 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 GALNT6Q8NCL4 622 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC20A1Q8WUM9 679 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 CELF6Q96J87 481 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 MCCC1Q96RQ3 725 aaPredicted RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 EIF3CQ99613 913 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 HERPUD2Q9BSE4 406 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 SELENOOQ9BVL4 669 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 STK33Q9BYT3 514 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC29A3Q9BZD2 475 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 SP110Q9HB58 689 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 GOLGA6AQ9NYA3 693 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 PHTF1Q9UMS5 762 aa14.13□□□□□ -0.15
PRPF40A-211ENST00000493468 TRBV23OR9-2A0A075B6M9 112 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 KIR2DS5A0A0G2JLQ3 304 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 A0A0G2JNG1 304 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 A6NCN8 305 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 NPIPB15A6NHN6 443 aaPredicted RBP14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 KIR2DS3K7RE56 304 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 KATNA1O75449 491 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 MT-ND3P03897 115 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 ELAVL4P26378 380 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 HSPA9P38646 679 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 FOXM1Q08050 763 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 NFATC2Q13469 925 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 DNASE1L3Q13609 305 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 KIR2DS5Q14953 304 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 NADK2Q4G0N4 442 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 VWA3BQ502W6 1294 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 DENND2CQ68D51 928 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 SCYL2Q6P3W7 929 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 IYDQ6PHW0 289 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 ZNF765Q7L2R6 523 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 ARHGAP12Q8IWW6 846 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC30A5Q8TAD4 765 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 THAP4Q8WY91 577 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 SCRN2Q96FV2 425 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 COX14Q96I36 57 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 C9orf72Q96LT7 481 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 ZNF599Q96NL3 588 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 TRIM55Q9BYV6 548 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 UCK1Q9HA47 277 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 CASS4Q9NQ75 786 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 VPS18Q9P253 973 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 KIAA1468Q9P260 1216 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 RCOR3Q9P2K3 495 aaPredicted RBP14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 KLHL3Q9UH77 587 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 TMEM98Q9Y2Y6 226 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 PCDHGB7Q9Y5F8 929 aa14.12□□□□□ -0.15
PRPF40A-211ENST00000493468 OTOGQ6ZRI0 2925 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 PIPSLA2A3N6 862 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 SIGLEC16A6NMB1 481 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 TCP11X1B4DZS4 312 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 DNAJB5O75953 348 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 KIAA0754O94854 1291 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 NDUFA10O95299 355 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 LDLRP01130 860 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 CALB1P05937 261 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 CCNYL3P0C7X3 344 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 UNGP13051 313 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 CHRNB2P17787 502 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 COL8A1P27658 744 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 NSFP46459 744 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 INPP5JQ15735 1006 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 TMCO4Q5TGY1 634 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 PHF13Q86YI8 300 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 AP2M1Q96CW1 435 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 NUDCD1Q96RS6 583 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC25A23Q9BV35 468 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 BRD8Q9H0E9 1235 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 ABCG8Q9H221 673 aa14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 ZNF768Q9H5H4 540 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-211ENST00000493468 ADAM22Q9P0K1 906 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms