RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 WDR53Q7Z5U6 358 aaPredicted RBP5.3□□□□□ -1.56
SND1-216ENST00000492840 CAMKMTQ7Z624 323 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 UBE2Q1Q7Z7E8 422 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 RFX6Q8HWS3 928 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 TMEM151BQ8IW70 566 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 GUF1Q8N442 669 aaKnown RBP5.3□□□□□ -1.56
SND1-216ENST00000492840 TMEM217Q8N7C4 229 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 MCUQ8NE86 351 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 KCNE4Q8WWG9 221 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 HDAC11Q96DB2 347 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 FAM89AQ96GI7 184 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 FBXL20Q96IG2 436 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 TUBB2BQ9BVA1 445 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 IFT27Q9BW83 186 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 C1QTNF5Q9BXJ0 243 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 TKTL2Q9H0I9 626 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 DENND2DQ9H6A0 471 aaPredicted RBP5.3□□□□□ -1.56
SND1-216ENST00000492840 PAG1Q9NWQ8 432 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 KCTD5Q9NXV2 234 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 GAR1Q9NY12 217 aaKnown RBP5.3□□□□□ -1.56
SND1-216ENST00000492840 ADAMTS5Q9UNA0 930 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 EXO1Q9UQ84 846 aaKnown RBP5.3□□□□□ -1.56
SND1-216ENST00000492840 SCN7AQ01118 1682 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 NCAPD2Q15021 1401 aa5.3□□□□□ -1.56
SND1-216ENST00000492840 UTYO14607 1347 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 H0YGN5 161 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 CLIC1O00299 241 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 PRPF4O43172 522 aaKnown RBP eCLIP5.29□□□□□ -1.56
SND1-216ENST00000492840 PLRG1O43660 514 aaKnown RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 KINO60870 393 aaKnown RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 PENKP01210 267 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 C1QTNF9P0C862 333 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 ZNF182P17025 639 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 ATF7P17544 494 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 PTPN2P17706 415 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 ACO1P21399 889 aaKnown RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 TACR2P21452 398 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 HIBADHP31937 336 aaKnown RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 CD86P42081 329 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 RAB28P51157 221 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 SLC12A2P55011 1212 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 TFAP4Q01664 338 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 CXCL9Q07325 125 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 ACTN3Q08043 901 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 RALGDSQ12967 914 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 GRIK3Q13003 919 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 TOB2Q14106 344 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 MORF4L2Q15014 288 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 PPA1Q15181 289 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 SHBQ15464 509 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 NAB2Q15742 525 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 MEP1BQ16820 701 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 SMU1Q2TAY7 513 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 NHSL2Q5HYW2 709 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 VWA5B1Q5TIE3 1220 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 DAB2IPQ5VWQ8 1189 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 TBC1D9BQ66K14 1250 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 LAIR1Q6GTX8 287 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 LRRC8EQ6NSJ5 796 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 ANKRD16Q6P6B7 361 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 ZNF474Q6S9Z5 364 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 RNF168Q8IYW5 571 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 PAQR4Q8N4S7 273 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 OR52N4Q8NGI2 321 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 FEZF2Q8TBJ5 459 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 TEKT4Q8WW24 435 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 CORO2AQ92828 525 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 CELF1Q92879 486 aaKnown RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 TMEM68Q96MH6 324 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 MGME1Q9BQP7 344 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 NUP85Q9BW27 656 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 NRIP3Q9NQ35 241 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 EPS15L1Q9UBC2 864 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 CACNG4Q9UBN1 327 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 LIPT1Q9Y234 373 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 CARD8Q9Y2G2 431 aa5.29□□□□□ -1.56
SND1-216ENST00000492840 HEMK1Q9Y5R4 338 aaPredicted RBP5.29□□□□□ -1.56
SND1-216ENST00000492840 CACNA1AO00555 2505 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 A0A1W2PPC1 479 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 DNM1LO00429 736 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 FAM20BO75063 409 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 ZC3H11AO75152 810 aaKnown RBP eCLIP5.28□□□□□ -1.56
SND1-216ENST00000492840 B3GALNT1O75752 331 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 SLC4A1P02730 911 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 ENO1P06733 434 aaKnown RBP5.28□□□□□ -1.56
SND1-216ENST00000492840 PTGER1P34995 402 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 IDUAP35475 653 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 EPS15P42566 896 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 CYP2J2P51589 502 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 BMXP51813 675 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 TUBB4BP68371 445 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 ECT2LQ008S8 904 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 SLC18A2Q05940 514 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 SLC14A1Q13336 389 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 FZD5Q13467 585 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 KCNC3Q14003 757 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 ZNF273Q14593 569 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 LASP1Q14847 261 aaKnown RBP5.28□□□□□ -1.56
SND1-216ENST00000492840 ANXA2RQ3ZCQ2 193 aa5.28□□□□□ -1.56
SND1-216ENST00000492840 PLK5Q496M5 336 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms