RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TMEM71Q6P5X7 295 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 WDR74Q6RFH5 385 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ATG14Q6ZNE5 492 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 Q6ZVL8 140 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 TMPRSS9Q7Z410 1059 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 HSD11B1LQ7Z5J1 315 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ZFAND4Q86XD8 727 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 NAGSQ8N159 534 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 PELI3Q8N2H9 469 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 EXD1Q8NHP7 514 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 PDCD6IPQ8WUM4 868 aaKnown RBP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 MAML1Q92585 1016 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 NKD1Q969G9 470 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 COL26A1Q96A83 441 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 SH3KBP1Q96B97 665 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 AP2M1Q96CW1 435 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 OR2M4Q96R27 311 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 LYSMD1Q96S90 227 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 EFHD1Q9BUP0 239 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 POLR1EQ9GZS1 481 aaKnown RBP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 EPB41L1Q9H4G0 881 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 RMI1Q9H9A7 625 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 PCDH18Q9HCL0 1135 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 FOXJ2Q9P0K8 574 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 RP1P56715 2156 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 A0A0J9YYE9 177 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SMAPO00193 183 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 MATN3O15232 486 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 PPM1DO15297 605 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SUV39H1O43463 412 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 PPFIA2O75334 1257 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SOD1P00441 154 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 TRBC1P01850 177 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 THRAP10827 490 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 FGF3P11487 239 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 CCNCP24863 283 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 EPHA4P54764 986 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 MAZP56270 477 aaKnown RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 TYRO3Q06418 890 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 GALNT2Q10471 571 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 NFATC3Q12968 1075 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 PAFAH1B3Q15102 231 aaKnown RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 HADHQ16836 314 aaKnown RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 AMZ1Q400G9 498 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 CRTC2Q53ET0 693 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 DCAF12Q5T6F0 453 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SLC30A9Q6PML9 568 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SFTPA2Q8IWL1 248 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 TP53INP2Q8IXH6 220 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SFRP1Q8N474 314 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 AOPEPQ8N6M6 819 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 OR10G6Q8NH81 332 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 COX14Q96I36 57 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 CCDC74BQ96LY2 380 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 CATSPER2Q96P56 530 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 TSGA13Q96PP4 275 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 NUDT22Q9BRQ3 303 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SLC12A9Q9BXP2 914 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 TRIM7Q9C029 511 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 ABCG8Q9H221 673 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 TRIT1Q9H3H1 467 aaKnown RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 STN1Q9H668 368 aaKnown RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 RDH14Q9HBH5 336 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 SARS2Q9NP81 518 aaKnown RBP9.08□□□□□ -0.96
HDAC3-212ENST00000492407 ETNK2Q9NVF9 386 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 KCNK4Q9NYG8 393 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 IL17BQ9UHF5 180 aa9.08□□□□□ -0.96
HDAC3-212ENST00000492407 LRP4O75096 1905 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 TTC24A2A3L6 582 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 OR5K4A6NMS3 321 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 GPR89AB7ZAQ6 455 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 MYO1FO00160 1098 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 TERTO14746 1132 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 DUX1O43812 170 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 PEX14O75381 377 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 CYP1A2P05177 515 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 PDHA1P08559 390 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 GPR89BP0CG08 455 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 CCL4P13236 92 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 MX2P20592 715 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 IL4RP24394 825 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 AK4P27144 223 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 MAP4P27816 1152 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 GARSP41250 739 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 ACTR1BP42025 376 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 ZNF165P49910 485 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 CLCNKAP51800 687 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 STC1P52823 247 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 ACTR1AP61163 376 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 MC2RQ01718 297 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 SLC25A11Q02978 314 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 NR1I3Q14994 352 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 PDK2Q15119 407 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 IFI16Q16666 785 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 SMTNL2Q2TAL5 461 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 CCDC122Q5T0U0 273 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms