RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 YWHAZP63104 245 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 RPP30P78346 268 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 BASP1P80723 227 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 HTRA4P83105 476 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ARF5P84085 180 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ZNF200P98182 395 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 IRF9Q00978 393 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PLAURQ03405 335 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 RUNX1T1Q06455 604 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CDK18Q07002 472 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SF3A3Q12874 501 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GRB14Q14449 540 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 HABP2Q14520 560 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 KRT81Q14533 505 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 EFTUD2Q15029 972 aaKnown RBP eCLIP3.8□□□□□ -1.83e-6■■■■■ 41.9
ATPAF1-206ENST00000492233 ARHGEF6Q15052 776 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SEC23BQ15437 767 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TBCCQ15814 346 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GRIK4Q16099 956 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CRY1Q16526 586 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 DBN1Q16643 649 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 DPY19L1Q2PZI1 675 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 RAB6CQ53S08 254 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 XKR4Q5GH76 650 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GLRA4Q5JXX5 417 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 HP1BP3Q5SSJ5 553 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 MPP7Q5T2T1 576 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 RBM20Q5T481 1227 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 THEMIS2Q5TEJ8 643 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 AADACL4Q5VUY2 407 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 KRT80Q6KB66 452 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC25A24Q6NUK1 477 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PMF1Q6P1K2 205 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC27A1Q6PCB7 646 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TRAT1Q6PIZ9 186 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CYP20A1Q6UW02 462 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ALKAL1Q6UXT8 129 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PACS1Q6VY07 963 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TIFABQ6ZNK6 161 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CYS1Q717R9 158 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC26A9Q7LBE3 791 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 STRADAQ7RTN6 431 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 NLRP9Q7RTR0 991 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 OTOAQ7RTW8 1153 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TMEM200AQ86VY9 491 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC26A11Q86WA9 606 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GATAD2AQ86YP4 633 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PSTKQ8IV42 348 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 IGDCC3Q8IVU1 814 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CDKL3Q8IVW4 592 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CRYBG2Q8N1P7 616 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 BEST2Q8NFU1 509 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 OR6Y1Q8NGX8 325 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 FIBINQ8TAL6 211 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SETD6Q8TBK2 473 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TCP10LQ8TDR4 215 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 FAM172AQ8WUF8 416 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 KCNE4Q8WWG9 221 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 FAM162AQ96A26 154 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 MTFMTQ96DP5 389 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 LRRC46Q96FV0 321 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC35A4Q96G79 324 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PDLIM5Q96HC4 596 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 APOPT1Q96IL0 206 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PIWIL1Q96J94 861 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 MSLNLQ96KJ4 702 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 HSFY1Q96LI6 401 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 NSUN5Q96P11 429 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 QKIQ96PU8 341 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PTPN18Q99952 460 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TUBA1CQ9BQE3 449 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 MRPL45Q9BRJ2 306 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TBCDQ9BTW9 1192 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SNRNP25Q9BV90 132 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CALN1Q9BXU9 219 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PBX4Q9BYU1 374 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ZCCHC2Q9C0B9 1178 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 KLC2Q9H0B6 622 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 RAB6CQ9H0N0 254 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 LRMDAQ9H2I8 198 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 MRPL46Q9H2W6 279 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 NRDE2Q9H7Z3 1164 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TLE6Q9H808 572 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ZMAT4Q9H898 229 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 EBF2Q9HAK2 575 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 BRF2Q9HAW0 419 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PLAC1Q9HBJ0 212 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CYP4F12Q9HCS2 524 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SLCO1B3Q9NPD5 702 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SAR1AQ9NR31 198 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 POLE3Q9NRF9 147 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GLRX2Q9NS18 164 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GPR27Q9NS67 375 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 SLC35D1Q9NTN3 355 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ETNK2Q9NVF9 386 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ATAD3AQ9NVI7 634 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GPATCH2LQ9NWQ4 482 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 HCFC1R1Q9NWW0 138 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms