RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 USP45Q70EL2 814 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 GALNT13Q8IUC8 556 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 SFRP1Q8N474 314 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 LZTR1Q8N653 840 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 NPWQ8N729 165 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 TEX19Q8NA77 164 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 RNF214Q8ND24 703 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 SCARF2Q96GP6 870 aaPredicted RBP14.38□□□□□ -0.11
SSR4-212ENST00000491833 NSMCE3Q96MG7 304 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 APMAPQ9HDC9 416 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 FBXO8Q9NRD0 319 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 PHTF1Q9UMS5 762 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 PCDHB3Q9Y5E6 796 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 PCDHGC4Q9Y5F7 938 aa14.38□□□□□ -0.11
SSR4-212ENST00000491833 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 TTC24A2A3L6 582 aaPredicted RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 NPIPB15A6NHN6 443 aaPredicted RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 POLR1CO15160 346 aaPredicted RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 KLK7P49862 253 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 MLLT10P55197 1068 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 DPTQ07507 201 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 CA9Q16790 459 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 PYCR3Q53H96 274 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 PPP1R15BQ5SWA1 713 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 TCTN3Q6NUS6 607 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 ADAMTSL4Q6UY14 1074 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 MARK2Q7KZI7 788 aaKnown RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 FNIP1Q8TF40 1166 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 NCSTNQ92542 709 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 ZNF599Q96NL3 588 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 NUDCD1Q96RS6 583 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 SNRNP25Q9BV90 132 aaKnown RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 SARS2Q9NP81 518 aaKnown RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 PLEKHB1Q9UF11 243 aaPredicted RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 MRPS18BQ9Y676 258 aaKnown RBP14.37□□□□□ -0.11
SSR4-212ENST00000491833 KCNMB2Q9Y691 235 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 RPS6KL1Q9Y6S9 549 aa14.37□□□□□ -0.11
SSR4-212ENST00000491833 TRBV23OR9-2A0A075B6M9 112 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 EPHB6O15197 1021 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 VPS4BO75351 444 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 AGFG2O95081 481 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 SOD1P00441 154 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 KRT7P08729 469 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 MAPK9P45984 424 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 EPHA4P54764 986 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 OGDHQ02218 1023 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 SLC10A7Q0GE19 358 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 TRAF2Q12933 501 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 NFATC2Q13469 925 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 ERMARDQ5T6L9 678 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 TSPAN33Q86UF1 283 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 TRIM74Q86UV6 250 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 CCDC13Q8IYE1 715 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 CBARPQ8N350 705 aaPredicted RBP14.36□□□□□ -0.11
SSR4-212ENST00000491833 BBS5Q8N3I7 341 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 SH3KBP1Q96B97 665 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 AP2M1Q96CW1 435 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 SCRN2Q96FV2 425 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 MCCC1Q96RQ3 725 aaPredicted RBP14.36□□□□□ -0.11
SSR4-212ENST00000491833 KCTD15Q96SI1 283 aaPredicted RBP14.36□□□□□ -0.11
SSR4-212ENST00000491833 KLHL3Q9UH77 587 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 CD84Q9UIB8 345 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 VPS4AQ9UN37 437 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 POLHQ9Y253 713 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
SSR4-212ENST00000491833 TEX15Q9BXT5 2789 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 LGALS16A8MUM7 142 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 RFPL1O75677 317 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 PYGLP06737 847 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 SLC2A4P14672 509 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 PSMA2P25787 234 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 DLSTP36957 453 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 UQCRFS1P47985 274 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 UBXN1Q04323 297 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 IQCB1Q15051 598 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 PPP6R3Q5H9R7 873 aaPredicted RBP14.35□□□□□ -0.11
SSR4-212ENST00000491833 HIST2H2BCQ6DN03 193 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 ASB18Q6ZVZ8 466 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 TECPR1Q7Z6L1 1165 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 EFCAB3Q8N7B9 438 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 MGME1Q9BQP7 344 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.35□□□□□ -0.11
SSR4-212ENST00000491833 ULBP3Q9BZM4 244 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 ABCG8Q9H221 673 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 EPB41L1Q9H4G0 881 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 PRDM8Q9NQV8 689 aa14.35□□□□□ -0.11
SSR4-212ENST00000491833 LIMA1Q9UHB6 759 aaKnown RBP14.35□□□□□ -0.11
SSR4-212ENST00000491833 MN1Q10571 1320 aaPredicted RBP14.35□□□□□ -0.11
SSR4-212ENST00000491833 K7EM74 188 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 PGLSO95336 258 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 ASMTLO95671 621 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 EML2O95834 649 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 ANKRD34CP0C6C1 535 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 ATP1A3P13637 1013 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 TNFAIP3P21580 790 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 ZNF135P52742 658 aaPredicted RBP14.34□□□□□ -0.11
SSR4-212ENST00000491833 RALGPS1Q5JS13 557 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 ARMC12Q5T9G4 340 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 FHL5Q5TD97 284 aa14.34□□□□□ -0.11
SSR4-212ENST00000491833 LRRC66Q68CR7 880 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms