RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ACACAQ13085 2346 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 FAM208BQ5VWN6 2430 aa16.48■□□□□ 0.23
PDLIM2-217ENST00000491330 BTNL10A8MVZ5 291 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 GM2AP17900 193 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 ADCY8P40145 1251 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 CTBSQ01459 385 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 TLE3Q04726 772 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 CDK18Q07002 472 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC14A2Q15849 920 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 TEX44Q53QW1 395 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 TFDP3Q5H9I0 405 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 PHF19Q5T6S3 580 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 KAZNQ674X7 775 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 MARK2Q7KZI7 788 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 LSM14AQ8ND56 463 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 SCAMP4Q969E2 229 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 NSMCE3Q96MG7 304 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 VAT1Q99536 393 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 PCDHA13Q9Y5I0 950 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 EPN1Q9Y6I3 576 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 RNF215Q9Y6U7 377 aa16.47■□□□□ 0.23
PDLIM2-217ENST00000491330 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 TDRD6O60522 2096 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 INPP4BO15327 924 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 NOBOXO60393 691 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 ZNF189O75820 626 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 NDUFA10O95299 355 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 FGF1P05230 155 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 PTMAP06454 111 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 CTNNA2P26232 953 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 SPINT3P49223 89 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 SKOR1P84550 965 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 NIPAL4Q0D2K0 466 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC10A2Q12908 348 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 AMZ1Q400G9 498 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 ZDHHC20Q5W0Z9 365 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 PDPK2PQ6A1A2 396 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 C11orf63Q6NUN7 778 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 SPRED1Q7Z699 444 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 IMP4Q96G21 291 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 SLC38A3Q99624 504 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 ZSCAN5AQ9BUG6 496 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 SPATA16Q9BXB7 569 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 MAGEE1Q9HCI5 957 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 ASCL3Q9NQ33 180 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 SPATS2LQ9NUQ6 558 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 TMEM98Q9Y2Y6 226 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 PCDHGA7Q9Y5G6 932 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 ALG6Q9Y672 507 aa16.46■□□□□ 0.23
PDLIM2-217ENST00000491330 OR5K4A6NMS3 321 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 GPR89AB7ZAQ6 455 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 TK2O00142 265 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 CST8O60676 142 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 STK10O94804 968 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 ECEL1O95672 775 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 GPR89BP0CG08 455 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 UGT1A5P35504 534 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 POLD2P49005 469 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 GPLD1P80108 840 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 RHDQ02161 417 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 TRA2AQ13595 282 aaKnown RBP eCLIP16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 PCSK7Q16549 785 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 QPCTQ16769 361 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 PYCR3Q53H96 274 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 ZNF569Q5MCW4 686 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 CCDC81Q6ZN84 652 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 KDELC2Q7Z4H8 507 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 DAAM2Q86T65 1068 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 PHYKPLQ8IUZ5 450 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 OR10G6Q8NH81 332 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 CCL4L1Q8NHW4 92 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 SCARF2Q96GP6 870 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 TTC25Q96NG3 672 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 FOXP3Q9BZS1 431 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 PRORYQ9H606 182 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 KCNK4Q9NYG8 393 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 KLHL8Q9P2G9 620 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 PISDQ9UG56 409 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 LOXL2Q9Y4K0 774 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 AKAP13Q12802 2813 aa16.45■□□□□ 0.22
PDLIM2-217ENST00000491330 PKD1L2Q7Z442 2459 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 APC2O95996 2303 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 A0A1W2PQM1 296 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 HACD1B0YJ81 288 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 SLC25A14O95258 325 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 PRLP01236 227 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 VCLP18206 1134 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 AK4P27144 223 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 ZBTB17Q13105 803 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 GTF2H3Q13889 308 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 TAF1BQ53T94 588 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 MFSD7Q6UXD7 560 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 CHST15Q7LFX5 561 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 CLEC14AQ86T13 490 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 SLC9B2Q86UD5 537 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 CPNE8Q86YQ8 564 aa16.44■□□□□ 0.22
PDLIM2-217ENST00000491330 PELI3Q8N2H9 469 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms